Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0348 ATGGTCTGTGTGGAGGATACTGGAATCGGGATTCCTTTTGCTGCGCAGGACAGGATTTTCATGCCTTTTGTTCAGGCAGACAGCTCAACCTCTCGAAACTATGGTGGAACTGGTATTGGCTTGAGCATCATGGTTGATGGAAAACCTGTTAGAGCTGCTGTGACTAGATACCATCTGAAGAGACTAGGGATACTGGTTAAAATTGCAAATAATATCAACAAGGCTATTGCTTTATGTGGGAAAAATGGTTCTTTAACATCTGGGTTATTCCAGCCGGATATAATCTTGGTTGAGAAGGACTCGTGGATGATCGGAGACGACGGGAGCTTCAACATATGGCAACTGGACTGGAAACAGAATGGGCATACATTCAAGTTGCCGAAAATGATCCTTCTGGCAACCAATATCAGTAATTCTGAGTTTGATAAAGCGAAGGCTGCAGGTTTTGCTGATACGGTAATCATGAAACCTCTGAGAGCTAGTATGGTGGCTGCTTGTCTCCAGCAAGTTCTCGGCGTCGGGAAGAAGAGGCAACAAGGGAAAGACTTGCCCAACGGTTCCACTTTTCTACAGAGTCTTCTTTGTGGAAAGAAAATTTTGGTGGTCGATGACAATGTGGTAAACCGGAGGGTGGCTGCCGGTGCGTTGAAGAAGTTTGGAGCCGATGTGAAGTGCGTAGATAGCGGCAAAGCTGCGCTCGAAATGCTTCAATTGCCTCATAGTTTTGATGCTTGCTTTATGGACATTCAAATGCCAGAAATGGACGGGTTTGAAGCAACGCGCCGAATCCGGATGATGGAAAGCGCGGCGAATGAGCAGCAGGCGAATGGAGGATCTGTTGAAGGAAATGCACAGAAAACTGAGTGGCATTTACCGATACTAGCAATGACAGCCGATGTGATTCACGCGACCTACGAAGAGTGCCTGAAATGCGGGATGGACGGATACGTGTCGAAGCCATTCGAGGAAGAGAATCTCTACCAAGCAGTTGCAAAGTTCTTCAAATCTAAGCCCATTTCAGACTCATGA 1029 0.4655 MVCVEDTGIGIPFAAQDRIFMPFVQADSSTSRNYGGTGIGLSIMVDGKPVRAAVTRYHLKRLGILVKIANNINKAIALCGKNGSLTSGLFQPDIILVEKDSWMIGDDGSFNIWQLDWKQNGHTFKLPKMILLATNISNSEFDKAKAAGFADTVIMKPLRASMVAACLQQVLGVGKKRQQGKDLPNGSTFLQSLLCGKKILVVDDNVVNRRVAAGALKKFGADVKCVDSGKAALEMLQLPHSFDACFMDIQMPEMDGFEATRRIRMMESAANEQQANGGSVEGNAQKTEWHLPILAMTADVIHATYEECLKCGMDGYVSKPFEEENLYQAVAKFFKSKPISDS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0348 342 PANTHER TWO-COMPONENT HISTIDINE KINASE 43 338 - -
Sto11g0348 342 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 43 - -
Sto11g0348 342 SUPERFAMILY CheY-like 44 172 IPR011006 -
Sto11g0348 342 PANTHER HISTIDINE KINASE 4 43 338 - -
Sto11g0348 342 PANTHER HISTIDINE KINASE 4 1 43 - -
Sto11g0348 342 SUPERFAMILY CheY-like 196 334 IPR011006 -
Sto11g0348 342 Pfam Response regulator receiver domain 199 267 IPR001789 GO:0000160
Sto11g0348 342 ProSiteProfiles Response regulatory domain profile. 198 334 IPR001789 GO:0000160
Sto11g0348 342 SMART REC_2 197 330 IPR001789 GO:0000160
Sto11g0348 342 Gene3D - 1 44 IPR036890 -
Sto11g0348 342 Gene3D - 45 175 - -
Sto11g0348 342 Gene3D - 192 341 - -
Sto11g0348 342 ProSiteProfiles Response regulatory domain profile. 41 171 IPR001789 GO:0000160
Sto11g0348 342 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2 44 IPR003594 -
Sto11g0348 342 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 44 IPR036890 -
Sto11g0348 342 CDD REC_hyHK_CKI1_RcsC-like 199 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0348 Sto-Chr11 4548342 4550610 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0348 1 43 Histidine Kinase Gene Family AT2G01830 83.721 1.42e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto11g0348 Response_reg 1.4e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0348 K14489 - qsu:112038491 545.428