Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0340 atggggaagaagaagaagagggcttCTTCCAAGGTTTGGTGTTACTATTGCGATCGCGAATTCGATGACGAGAAGATTTTAGTTCAGCATCAGAAAGCTAAGCACTTCAAATGCCATGTCTGCCATAAGAAGCTCTCGACCGCTGGCGGCATGGCAATCCATGTGCTTCAGGTCCACAAAGAGAGCGTCACCAAgGTGCCCAATGCAAAACCTGGCAGAGATACAACAGAGATTGAAATATATGGAATGCAAGGGATCCCACCTGACATCTTGGCTGCTCATTATGGAGAGGATGAGGATGATGTTCCATCAAAGGCAGCCAAAGTGGATATCCCATCAACTCAGCTTGTAGGTGGAGTGATTCCACCACCACTTGGCATGGGATATCCTCCTCAGTCAACCTTGGGCGCAATGCCACCTATTTATAATCCAGCAGTACCGATGCCGCCGGCAGGTTGGCCTATTCCACCACGACCTCAGCCTTGGTATCCGCCAGCTCCAACTGTTTCCATTCCCCCTCCTGCTCCATATTCACAACAGCCGTTATTTCCTGTTCAGAATGTTAGGCCACCTCTACCAGCAACTGCTGCGCTTTCAACTTCTCAGATTACTCCACCTGGATTGCCGCCACCCACACCCGTTTCTGTTTCACAACCTTTGTTTCCTGTTGTTGGAAATAACAATAATGCTACACAAAGTTCAACACTTTCTGCCCCATCACTATCTCCCACTGTCCCATCAATAACACCTACATTGTCTGCAAGTGCCCCTGTTGATGCATATTCAGGTGCCAACACATCTTTGACAAATAGTTATCAAACGTTAGGGATTCCAGTAGGGACGGCAAGCAATTCGCATTCTTATGCTTCTGGTCCAAATACTGGTGGTCCTTCAATTGGACCTCCACCAGTAATTGCAAACAAAGCTCCTGCGACTCAACCTGCCACCAATGAGGTCTATTTAGTTTGGGATGATGAGGCAATGTCCATGGAGGAAAGAAGAATGTCCTTGCCAAAATACCAGGTGCATGATGAAACTAGCCAGGTAAGTTATACTACCTCTTTAATAGATGGAGTTGCTTTCACATCTAACCAGATCCGTAGCAtcattacaatttattttatggaACAAGTGAATTCAGACTTGGCCCAGATGAGCTCCATCGATGCTGCCATAGACAAGAGGATACTCGAAAGCAGGCTAGCCGGTCGAATGGCATTTTAG 1224 0.4542 MGKKKKRASSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRDTTEIEIYGMQGIPPDILAAHYGEDEDDVPSKAAKVDIPSTQLVGGVIPPPLGMGYPPQSTLGAMPPIYNPAVPMPPAGWPIPPRPQPWYPPAPTVSIPPPAPYSQQPLFPVQNVRPPLPATAALSTSQITPPGLPPPTPVSVSQPLFPVVGNNNNATQSSTLSAPSLSPTVPSITPTLSASAPVDAYSGANTSLTNSYQTLGIPVGTASNSHSYASGPNTGGPSIGPPPVIANKAPATQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDETSQVSYTTSLIDGVAFTSNQIRSIITIYFMEQVNSDLAQMSSIDAAIDKRILESRLAGRMAF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0340 407 MobiDBLite consensus disorder prediction 219 245 - -
Sto11g0340 407 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Sto11g0340 407 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Sto11g0340 407 Gene3D Classic Zinc Finger 1 66 - -
Sto11g0340 407 SMART c2h2final6 12 35 IPR013087 -
Sto11g0340 407 SMART c2h2final6 36 59 IPR013087 -
Sto11g0340 407 PANTHER ZINC FINGER PROTEIN 207 1 407 - -
Sto11g0340 407 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 407 - -
Sto11g0340 407 MobiDBLite consensus disorder prediction 198 245 - -
Sto11g0340 407 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0340 1 374 C2H2 Transcription Factor Family AT1G30970 61.125 2.11e-140 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto11g0340 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0340 - - gsj:114421245 593.964