Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0302 ATGAGTTTGGATTTCAGCAAGCATGTGGAACCTGATCGCCTTTTTGGCTGCCTCCAAAAACTCTACGGCCAACAACTGATGGGACACTCGTGTGTAGAGAGGCTCAGCAAAGATGATGTTCAAAAAATGCAGTGGGAGGTTTTGGAGGCTAAGATTGGGAACTGGATTCATTACATGCGGATTGCTGTAAGGAAGAAGGGGTTTGATTCTTTGAGAACTCAATGTTTTGCTGAAGTCACTGCTAACAGTGTGGCTATGCTTCTCAGTTTTGGAGAGGCTATTGCTCTCCAGAAAAGTTTTACCGAGAAGGTTGATGAAGCTTGTTGTGTTGGTTGTTCTGGTTGGGATTGTTCGGATTCCTTTGCTCTTGGACGCCTTGGTGGAGGTGGCAAGACATCATCATATGAGGTTGAGGGCCACATGTTTGGACCGTTGCTTGGGTTGACAACTGGCATCCCTCCTATTCTTAGACCATCTCTCCATCAGGtaaacttttatgtcatcaaacatGGTCCTGGACGGAATGCTGACTTTGTCCAAAACCTTGGTGGAATCTGCTTCAAATGTTGGTATGCAGATTCATTAACCTTCTGTATCTCCAGCATTGCCCTCTCCCATTCTTGTGGATGGCGCACACAAAATCTTTGGTCAACTCCAGGGAGTAACTCCTCTAGTGCTGGAACTTCAACAACTGCAATTGCAATTGGCAACATCTGGTCATTCGGGTCTCTTCCTATAGTTGCCAATAATTGTCTCCCACATGGTGTCTTTAGGAAACAACCATCCAAACCTATGATGGGCCTACATAGTATGCTACTCTTCTTTCATGCATCAAGACAAATGTACAACCTTTCAAATTGTGGAGGACCTAGTGTGCCATCTTCTGCAGTAGTTTTGCTTTCTGCGGGTACTGCATCATGTATTGCTGCATCCGTTATTGCTGCGTTAGGTACATCTACTGTTGCTACATTGGGTACATCTACTGCCTGTGATTCTGTAACCTCAACATCAAACAACCCATGGTTAAAcaatccatcttcttcttcactgtCGTTGAACCTGATATTCAATGCACTGTCATCGCTCTCATATTGA 1095 0.4311 MSLDFSKHVEPDRLFGCLQKLYGQQLMGHSCVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVRKKGFDSLRTQCFAEVTANSVAMLLSFGEAIALQKSFTEKVDEACCVGCSGWDCSDSFALGRLGGGGKTSSYEVEGHMFGPLLGLTTGIPPILRPSLHQVNFYVIKHGPGRNADFVQNLGGICFKCWYADSLTFCISSIALSHSCGWRTQNLWSTPGSNSSSAGTSTTAIAIGNIWSFGSLPIVANNCLPHGVFRKQPSKPMMGLHSMLLFFHASRQMYNLSNCGGPSVPSSAVVLLSAGTASCIAASVIAALGTSTVATLGTSTACDSVTSTSNNPWLNNPSSSSLSLNLIFNALSSLSY 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0302 364 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 104 IPR004140 GO:0000145|GO:0006887
Sto11g0302 364 SUPERFAMILY Cullin repeat-like 32 103 IPR016159 -
Sto11g0302 364 Gene3D Exocyst complex component Exo70 12 107 - -
Sto11g0302 364 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 31 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0302 Sto-Chr11 3929877 3933409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0302 32 104 EXO70 exocyst subunit family AT5G52340 67.442 2.84e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0302 K07195 - ming:122079874 113.235