Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0270 ATGGGACTTGGGGATCCGTACGCGCCGCTTTCCTTTTGTATGTTGTCTGTTTGGTTGCTAGGAAAATGTAGGAATCATAAGGAATTTCAGATCAAGCAAGTTCCTCTTTTCGTTCTCATGGACGATGATGCATTGAACATGCGCAATTGGGGCTATTATGAACCCTTCAAAGGGGGGCATCTTGGTCTGCAGCTCATGTCAAGTATGACAGATCGAGACATCAAGCCATTCTTGCCGGGCCGTGACCCCACTATGTTAGTTAGTCCAAATGGAACCTTTCACCCTCGTGATTGTGTTGTTTCGGAAGCTCCGATTCCAATGAACTATGTTAGAGATAGTTGGATAAGCCAGAGAGATAGGTTTCTCAATATGCTGCCCACAAATCCTAATTATTCTGTTCTTCCTGAAACATCTGGCGCTCCCTCCTTGCAAATGATACAGCCACCTGATACTTCCAAAGATGATAGGGTGAATCGAATTGAAGAACCTCCTGTTAAAAAGGAAGGTGGCCAATCGAAAAAAAGGCAAGGGGCTGCTCCGAAAACTCCAAAAGCGAAGAAGCCTAGGAAGCCAAAGGATAACAGCAATGCTTTAGTTCAACGAGAGAAGCCAGCGAGGAAGGCTATGGAGGTTGTAATAAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCAGTTTGCTCATGTACTGGTACTCCGCAGCAGTGTTATCGATGGGGCTGTGGTGGCTGGCAATCAGCATGTTGTACCACAAATGTGTCTATGTATCCTTTGCCAATGAGCACTAAAAGGCGTGGTGCGAGGATAGCTGGACGGAAAATGAGCCAAGGTGCTTTTAAGAAGGTTTTGGAGAAGCTTGCAGCTGAAGGTTATAATTTCGGTAATCCAATTGATCTGCGGACTCACTGGGCTAGACATGGCACCAACAAGTTTGTCACTATAAGGTAG 951 0.4543 MGLGDPYAPLSFCMLSVWLLGKCRNHKEFQIKQVPLFVLMDDDALNMRNWGYYEPFKGGHLGLQLMSSMTDRDIKPFLPGRDPTMLVSPNGTFHPRDCVVSEAPIPMNYVRDSWISQRDRFLNMLPTNPNYSVLPETSGAPSLQMIQPPDTSKDDRVNRIEEPPVKKEGGQSKKRQGAAPKTPKAKKPRKPKDNSNALVQREKPARKAMEVVINGIDMDISGLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFGNPIDLRTHWARHGTNKFVTIR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0270 316 MobiDBLite consensus disorder prediction 189 204 - -
Sto11g0270 316 MobiDBLite consensus disorder prediction 152 174 - -
Sto11g0270 316 MobiDBLite consensus disorder prediction 133 151 - -
Sto11g0270 316 SMART GAGA_bind_2 40 316 IPR010409 -
Sto11g0270 316 MobiDBLite consensus disorder prediction 133 204 - -
Sto11g0270 316 Pfam GAGA binding protein-like family 40 316 IPR010409 -
Sto11g0270 316 PANTHER - 40 316 IPR010409 -
Sto11g0270 316 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 40 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0270 Sto-Chr11 3501341 3502651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0270 40 316 BBR or BPC Transcription factor family AT2G01930 58.804 5.78e-113 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Sto11g0270 GAGA_bind 2.7e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0270 - - qsu:111986496 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0270 11 3501341 3502651 Sto11g0270 11 3501341 3502651 ECH