Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0130 ATGACAGTTGTCAAATCTGCATCTTATACTTACAACAGGACATACTGTGCTGAGATTGCTCACAAAGTCTCCACAAGGAAGAGAAAGGATATAGTTGAGAGAGCTGCTCAGCATGATGTTGTTGTGACAAACAAAACAGCCAGACTACGCAGCCGAGATGAATAG 165 0.4242 MTVVKSASYTYNRTYCAEIAHKVSTRKRKDIVERAAQHDVVVTNKTARLRSRDE 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0130 54 SUPERFAMILY Ribosomal protein L32e 9 52 IPR036351 -
Sto11g0130 54 PANTHER 60S RIBOSOMAL PROTEIN L32-1 10 53 - -
Sto11g0130 54 Pfam Ribosomal protein L32 11 44 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sto11g0130 54 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 10 53 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0130 Sto-Chr11 1683170 1683430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0130 11 54 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 75.000 4.16e-18 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0130 K02912 - gmx:100787561 78.1814