Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0119 ATGGCGCGCGGACGGAAGCGGCTGAAGAAGGAGAACGTCGAGCTTTCACCGCCACAGCACCACGAGTGCGAGAAGCAAGACGGAGAAGAAGCAGAAGCCGCAGCGATGGGCGAGGGTTTCAAGATTCAGCCTTCGGTGGAAGGCGACGGTGGAGGAGAAGGAGGGGAACGACTGGAAAGTGTGGGTGTTGTCGCCGATAGTGGCAGCGGAGGCGGTGGCTTTGCGGGACAAGTCGAGACTGGTCCATTCGCGGCCAAAACGGAAGTCACGGAAGTTGTGAAGAAGAAACGTGGCAGAAAAAGCAAGGCGGAAAAGGAGGCGTTGAAGAAAGCGGCTTTGGCGAAGGATACGGCGGATTCTGGTGCTTCACAATGTGCTGTAAATTGTGGTGACAATATGGCAGAAGGTGATGGAGTAGGTGTGGCGGTTTCTATTACGAAGCGTGGTAGAAGAGTAACGAAGAAGTTTGTCGATTTAGGTGTTGACTTGAGCGGCCTGGATGATAGCTTTGATGATGAAGATAGGAAACGAGTATATAGGAAAGTGCGAGGGAGGAAAGGTCGTAAAAAGGCGAAAGTTGCTGCAGATAAAGTAGGTACGACCAAGGACGGTTTAGGAATCAAAGATAACAGTGATATAGTTGGGGAGGAGTTAGTATATTTGAAGCAGAATGATACTGGAGATAATGAGGGGGATTGCAGTGGTGGTGAATTGAAGGAAGTGAATATTAAGAAGTGTAAAAGCCAAAGGGTCTTGCATGACGATAGGGATAAAGTACAAGATGGAATGGTAGAGTATGATTCTGAAGTAGTTGGCGGAGACAGGAAAAATTCAAAGCCTGGGAAGGCAACTGACAGTGATAAGGCAGCAGATAAAGTTTTGGAGGCTCATGGAAAAGATTATTCAGAAAGCAAACTGAGTAAAAAATATAGTTTGAGGGCCCCTAAACCTAGGGTTGATATAGATGAAATGCCCAAAAAGAAGAGAGATTCTGAATGGATCGAAAAAAAGTCCTTAATGTGCCATCAATGTCAGAGAAATGATAAAGGCAGGGTTGTTAGGTATCCTCAGTTGAGAGAGGAAGATATAGCTGAGGCATGTCCTGTGTGCCGTGGAAACTGCAATTGTAAAGCGTGTTTGCGCTCTAACGAATTAATTGAGaaaatgaagaacaaagaacgaaaaaagaacaaaaagaacaaagaacaaaaagaacaagaagaaCAAATCTATAAATATGAGGAAGTTGAGCACCGTAAGTACTTGCTACAAGCGCTTCTCCCATATTTAAAGCAGCTATATGAAGAACAAATGGCCGAGAAGGAGATAGAAGCTAAGAGACAAGGTCTTCCACTGTCAGAGCTTCAGGTAGAACGGGCAGATTGTTCTGATAAGGAGCGTGTCTACTGTGACAACTGTAGAACTTCAATTTTTGATTGTCACCGAAGCTGTCAAAATTGTTCTTTTGATCTATGTCTGGTCTGTTGCCGTGAGATTCGCCAGGAGAATCTGGTTGGAGGTGCCGATCCAGTTAAGGTTGACTTTATCAGCTGGGGGCTGGACTATGTGCACGgtggaaagaaaaatgaaactgaAATAACTGAACCGCATATTGACACTAAGACTGAGGATCGTAACTGGTCAAAATCTTGTTTGAAGATGACAAGTGATGGTGGAATCTCTTGTCCAAGGATTGATGGTGGATGTGGTCATGCAAATCTTGAACTCCGATGCATATTTTCTAATAATTGGATAACGGAGTTAGTAATGAGAGCAGAAAATATAGCTCAAGTTTATAAGCTAGAAGATTCAACACAGACAAGTAAGCAGTGCTGTTCATGTTCCAACCTTGACAGCAACAATAACAGTGGTGTTCTGAATAAGAATATGAGGAAGGCATCTTCACGTGAAGATCCCAGTGACAATGACAACTATTTATACTGTCCAAGGGCCATAGATGTGGGACCTGCAGATCTGAAGCATTTTCAGTGGCACTGGAGTAAGGGGGAACCTGTGATTGTCAGCAATGTGCTTGAATGCACGTCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTTCGTGAGATAACAAAAATCAAGCATGTTAAACATTTGGCAGTGAAGGTCATTGATTGCTTGGATTGGTGTGAGGGAGACATCAATATCCACCAATTCTTTACAGGGTACACTGAAGGTCGATATGATAACAAAGGCTGGCCCCAGATATTGAAACTGAAAGATTGGCCTCCGTCCAATTTATTTGAAGAGCGTTTACCACGACATTGTGCTGAGTTCATATCTTCCTTACCCTATAAGGAATATACTGATCCTCATCATGGTGTTTTAAACCTTGCTTCAATGTTACCGGATGATAGTATAAAGCCAGACATTGGGCCAAAGACGTATATTGCATATGGAATTGCTCAGGAGCTTGGGCGTGGTGATTCAGTGACAAAGCTTCATTGTGATATGTCTGATGCTGTGAATGTATTGACACATACTGTTCAAGTGACCCTTGGTGATGACAACTTAGCATCaatagagaaaatgaaaaaaaagcaCCTTGACCAAGACAGAAGGGAGCTAAGGGAGATATATGGTGATGGTGAAGGGGTAGAAGCTAATGTTCAGAATGGAAAAACAACAGATTTTGAAAACATATTGCTTGTAGATGATTCCGTTGAGGGTGGTGCTATCTGGGACATTTTTAGGAGACAGGATGTTCCTAAATTGCAGGAGTACCTTAAGCAGCATTTTAGAGAATTCAGGCATGTCAATTGCTGTCGATTACAGAAGCTGTGGATGCTGAATACTGACTTTGCTGTTCTCAAATTTCTGATTAATGTTAAACCATATggaaatgttttatatttggttATTCATCCTATCCATGATCAGACCTTTTATCTGACCATGGAGCATAAAAGGAAGCTAAAGGAAGAATATGGAATTGAACCATGGACATTCGTTCAGAAACTAGGTGATGCAGTTCTGATTCCAGCTGGTTGTCCTCACCAAGTGAGAAATCTGAAGTCATGCATTAAGGTTGCCCTTGATTTTGTCTCACCTGAAAGTATAGACGAGTGTTTCCGTTTGACAAACGAATTCCGCACACTACCCATAAATCACAAGGCGGCggaggataaattggagGTGAAGAAAATGACCATTCATGCAATGAAGGACATAGTAGAAAAGTTAGAGGCAGCAAGACAATTAGTTGCTAAATCAAGTACTTATTTGTGTTTTCCTTTGGATCTGGGAGGTCGTATTAATGATAAACCCTTTGTTGACAAAATGCGAGGCAAGATGGAAAATTGGAAGTCTAAACTCTCCAAAGCTGGGAAAGTAACTCTGTTGAAGTCAGTTTGTGCCCTTTTGATATCTTACTATATGCAATGCATTGCCTTTCCTTCAAAAATCTGTGATGATATAGATAAACTTCAGAGAGATGAAATCTGGAGATCATAA 3477 0.4118 MARGRKRLKKENVELSPPQHHECEKQDGEEAEAAAMGEGFKIQPSVEGDGGGEGGERLESVGVVADSGSGGGGFAGQVETGPFAAKTEVTEVVKKKRGRKSKAEKEALKKAALAKDTADSGASQCAVNCGDNMAEGDGVGVAVSITKRGRRVTKKFVDLGVDLSGLDDSFDDEDRKRVYRKVRGRKGRKKAKVAADKVGTTKDGLGIKDNSDIVGEELVYLKQNDTGDNEGDCSGGELKEVNIKKCKSQRVLHDDRDKVQDGMVEYDSEVVGGDRKNSKPGKATDSDKAADKVLEAHGKDYSESKLSKKYSLRAPKPRVDIDEMPKKKRDSEWIEKKSLMCHQCQRNDKGRVVRYPQLREEDIAEACPVCRGNCNCKACLRSNELIEKMKNKERKKNKKNKEQKEQEEQIYKYEEVEHRKYLLQALLPYLKQLYEEQMAEKEIEAKRQGLPLSELQVERADCSDKERVYCDNCRTSIFDCHRSCQNCSFDLCLVCCREIRQENLVGGADPVKVDFISWGLDYVHGGKKNETEITEPHIDTKTEDRNWSKSCLKMTSDGGISCPRIDGGCGHANLELRCIFSNNWITELVMRAENIAQVYKLEDSTQTSKQCCSCSNLDSNNNSGVLNKNMRKASSREDPSDNDNYLYCPRAIDVGPADLKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFREITKIKHVKHLAVKVIDCLDWCEGDINIHQFFTGYTEGRYDNKGWPQILKLKDWPPSNLFEERLPRHCAEFISSLPYKEYTDPHHGVLNLASMLPDDSIKPDIGPKTYIAYGIAQELGRGDSVTKLHCDMSDAVNVLTHTVQVTLGDDNLASIEKMKKKHLDQDRRELREIYGDGEGVEANVQNGKTTDFENILLVDDSVEGGAIWDIFRRQDVPKLQEYLKQHFREFRHVNCCRLQKLWMLNTDFAVLKFLINVKPYGNVLYLVIHPIHDQTFYLTMEHKRKLKEEYGIEPWTFVQKLGDAVLIPAGCPHQVRNLKSCIKVALDFVSPESIDECFRLTNEFRTLPINHKAAEDKLEVKKMTIHAMKDIVEKLEAARQLVAKSSTYLCFPLDLGGRINDKPFVDKMRGKMENWKSKLSKAGKVTLLKSVCALLISYYMQCIAFPSKICDDIDKLQRDEIWRS 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0119 1158 Pfam JmjC domain, hydroxylase 962 1022 IPR003347 -
Sto11g0119 1158 SUPERFAMILY Clavaminate synthase-like 657 1074 - -
Sto11g0119 1158 MobiDBLite consensus disorder prediction 1 37 - -
Sto11g0119 1158 Gene3D Cupin 651 1048 - -
Sto11g0119 1158 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 87 1071 IPR045109 GO:0032454|GO:0033169
Sto11g0119 1158 MobiDBLite consensus disorder prediction 267 290 - -
Sto11g0119 1158 ProSiteProfiles JmjC domain profile. 779 1039 IPR003347 -
Sto11g0119 1158 Coils Coil 382 416 - -
Sto11g0119 1158 MobiDBLite consensus disorder prediction 7 34 - -
Sto11g0119 1158 SMART cupin_9 760 1039 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0119 Sto-Chr11 1570363 1582805 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sto11g0119 JmjC 1.5e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0119 K15601 - gmx:100780803 906.746