Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto11g0086 | ATGTCAGAGTCAAACGCAGTAGCGAACGGACTGGCTGGTGCAGGTGGTGGCATTATTGCACAAATTATAACTTATCCTCTACAAACGCCATTTCCATGGCAGGTGAATACACGCCAGCAAACCGATAGAACGGTCAAGAGGAGGAAAGAGGGGCTACCTAATTCCCCTAATACGCTTCTTCAGATCCTTCAGGTTATTAGAAGTGAGGGGTGGGGTGGGCTGTACAGTGGCCTCAAGCCTTCTCTTCTCGGGACTGCTGCTTCTCAGGGTATTTACTACtacttttatcaagtttttaaaaacaaggCTGTGGCCATTGCTGCTGCCCGTAAAGTCAAAGGATATGGAGATGGTACTGTTAGCATGCTTGGTTGGCTTGTAGTGGCTGCTATTGCTGGGTCCTTGAATGTTTTGTTTACAAACCCAATTTGGGTTATAGTGACTCGCATGCAGACACATACCCAAGCAGAACGAATAATTATGGAGGGAAAGAAAGAAGCGTTAAGGAGGGAAGCTTCTGAAAGCAGTTCTGCAGCTTCAACACTACAAGACCAATTGGCTCAACTGGATTCCATAAAACCTCAACCATATGGAACTTTACGTGCAGCAAATGAAATCTATAGTGAAGCAGGTATTAATGGATTTTGGAAGGGTGTCATCCCTTCTTTGATTATGGTATGCAATCCATCAATCCAGTTTATGATTTACGAGAGCTCGTTAAAGCATCTAAGGGCAAAACGCTCTGCTAAGAAGCAGGGGAATAAAAGTGTATCTGCTTTGGAGGTTTTCTTGCTGGGAGCCTTAGCAAAACTTGGAGCTACTGTCTCAACATATCCCTTGTTGGTTGTCAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAATAGCTCATTAAGATACTCAGGTACTTTTGATGCAATACTTAAAATGATCCGATACGAGGGATTGCCTGGCTTTTATAAGGGGATGAGCACAAAGATAGTACAGAGTGTTTTTGCAGCTTCTGTTCTATTCATGGTTAAGGAGGAGCTTGTCAAGGCTTACATGGTGTTAGCAGATAAGAGCAAGAAAGTTCTCTTCAGTTTGAGCACTTGA | 1098 | 0.429 | MSESNAVANGLAGAGGGIIAQIITYPLQTPFPWQVNTRQQTDRTVKRRKEGLPNSPNTLLQILQVIRSEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGYGDGTVSMLGWLVVAAIAGSLNVLFTNPIWVIVTRMQTHTQAERIIMEGKKEALRREASESSSAASTLQDQLAQLDSIKPQPYGTLRAANEIYSEAGINGFWKGVIPSLIMVCNPSIQFMIYESSLKHLRAKRSAKKQGNKSVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGGNSSLRYSGTFDAILKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKAYMVLADKSKKVLFSLST | 365 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto11g0086 | 365 | Pfam | Mitochondrial carrier protein | 256 | 349 | IPR018108 | - | |
| Sto11g0086 | 365 | Pfam | Mitochondrial carrier protein | 120 | 244 | IPR018108 | - | |
| Sto11g0086 | 365 | Pfam | Mitochondrial carrier protein | 4 | 101 | IPR018108 | - | |
| Sto11g0086 | 365 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 4 | 357 | IPR044712 | GO:0006862|GO:0055085 | |
| Sto11g0086 | 365 | PANTHER | PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER | 4 | 357 | - | - | |
| Sto11g0086 | 365 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 120 | 242 | IPR018108 | - | |
| Sto11g0086 | 365 | SUPERFAMILY | Mitochondrial carrier | 5 | 344 | IPR023395 | - | |
| Sto11g0086 | 365 | Coils | Coil | 165 | 185 | - | - | |
| Sto11g0086 | 365 | Gene3D | Mitochondrial carrier domain | 107 | 351 | IPR023395 | - | |
| Sto11g0086 | 365 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 4 | 102 | IPR018108 | - | |
| Sto11g0086 | 365 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 257 | 348 | IPR018108 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto11g0086 | Sto-Chr11 | 1127543 | 1137028 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto11g0086 | 51 | 349 | Chloroplast and Mitochondria Gene Families | AT1G25380 | 27.244 | 2.94e-29 | 114 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto11g0086 | K13354 | - | gmx:100775304 | 562.377 |