Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0034 ATGAGTTTGCCACCAATACCGTCTAACGTGCTTAAAGTGGACAGCGCAAGCCCTGAATGGATGAGCAAAGCCGACAACGCATGGCAGCTGATGGCAGCAACACTCGTTGGGATGCAGAGTGTGCCTGGGCTCATAATCTTGTACGGAGGAGCAGTGAAGAAGAAATGGGCAGTGAACTCAGCGTTCATGTCACTCTATGCTTTTGCATGTGTTTTCTTCTGTTGGGTGATATGGGGTTACAGGTTGTCTTTTGGGGATAAGCTTCTTCCGTTCTGGGGGAAGCCTGGTGTGTCACTGGATGAGAAGTATCTCTTCACACAGGCCTTTCTTGGCTTGTTCCCAAATGCCACTATGATATATTTCCAGGGTGTATTTGCTTGCATCACTTTGATTTTGATCGCTGGGGCCGTCTTGGGTCGCATGAATTTCTACGCGTGGATGCTGTTTGTGCCTCTTTGGCTCACTTTCTCTTACTCTTTCACAGCTTTCAGTATTTGGAGTACTAATGGCTTTCTCACAAAGCTAGGGATCATAGATTACTCTGGGGGATATGTCATTCATTTGTCTTCCGGGGTTGCTGGATTCACAGCAGCATATTGGGTTGGGCCTAGGCTAAACAAGGACCGAGAAAGGTTTCCTCCAAACAACATTCTACTGATGCTGGCAGGGGCAGGACTATTGTGGATGGGATGGACAGGGTTCAACGGAGGGGACCCTTACGTTGTAAGCATGGATGCTTCCTTGGCTGTATACAATACCCATGCTTGCACTGCCACCAGCTTGCTCACTTGGGTCATCCTTGACGTAATTTTCTTCCGTAAGCCTTCCGTCATTGGTGCTGTTCAAGGCATGATCACTGGTTTGGTTTGCATTACTCCTGCTGCAGGCGTAGTGCAAGGATGGGCAGCACTTATAATGGGGGTATGCTCAGGCTCAATTCCATGGTTCACCATGATGGTAATCCATAAGAGATCCAAGCTTCTTCAGAAGGTAGACGACACTATGGCTGTGTTCCACACTCACGCCATCGCCGGAACCCTTGGAGGCATCCTCACTGGTCTCTTTGCTGAGCCCAAGCTTAACTTTCTCTTCTATGCTAATTACGCCCAATACGTTGGCCTCTTCTATGGTATCAAAATGAACGACGTCAAAACTGGCTTACGACAAATGGGCATCCAATTACTTGGGATTTTGTTCGTCGTTTTGCTCAATGTCATAAGCACCAGCTTGATTTGTCTCTTCATTCGCCTCTTGGTGCCTTTAAGGATGTCCGAAGAGGACATGGAGATAGGGGACGAGGCTGCTCATGGAGAAGAAGCCTATGCCATATGGGGTCAAGGGGATAAGCTTGACACTTCAGTTTCCAAGTATGGGAGTTCCTTGTACGACGATGTTGAAGCAGCTGGGACAAGGAAAAAGCGTGCAGGACAAGTTGAGATGACATAA 1446 0.4799 MSLPPIPSNVLKVDSASPEWMSKADNAWQLMAATLVGMQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVIWGYRLSFGDKLLPFWGKPGVSLDEKYLFTQAFLGLFPNATMIYFQGVFACITLILIAGAVLGRMNFYAWMLFVPLWLTFSYSFTAFSIWSTNGFLTKLGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYVVSMDASLAVYNTHACTATSLLTWVILDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALIMGVCSGSIPWFTMMVIHKRSKLLQKVDDTMAVFHTHAIAGTLGGILTGLFAEPKLNFLFYANYAQYVGLFYGIKMNDVKTGLRQMGIQLLGILFVVLLNVISTSLICLFIRLLVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLDTSVSKYGSSLYDDVEAAGTRKKRAGQVEMT 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0034 481 ProSitePatterns Ammonium transporters signature. 179 204 IPR018047 GO:0008519|GO:0016020|GO:0072488
Sto11g0034 481 PANTHER AMMONIUM TRANSPORTER MEP2 5 481 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sto11g0034 481 SUPERFAMILY Ammonium transporter 20 423 - -
Sto11g0034 481 Pfam Ammonium Transporter Family 27 441 IPR024041 GO:0008519|GO:0016020|GO:0072488
Sto11g0034 481 PRINTS Rhesus blood group protein signature 122 138 IPR002229 GO:0005887
Sto11g0034 481 PRINTS Rhesus blood group protein signature 218 236 IPR002229 GO:0005887
Sto11g0034 481 PRINTS Rhesus blood group protein signature 249 271 IPR002229 GO:0005887
Sto11g0034 481 Gene3D Ammonium transporter AmtB like domains 7 445 IPR029020 -
Sto11g0034 481 PANTHER AMMONIUM TRANSPORTER 5 481 - -
Sto11g0034 481 TIGRFAM amt: ammonium transporter 25 441 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0034 Sto-Chr11 468182 474667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0034 116 468 Inorganic Solute Cotransporters AT2G38290 62.323 3.95e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0034 K03320 - gmx:100787856 839.721