Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3228 ATGTTAGAAGGTGGTGCGAAATTCCCTGGAATAATAGACCTaaacaaacataataataaCTATTATGATTTTTCTCAAGGCTTTTACCATAAGCTTGAGGAGGGTACCAATATGTCAATTGATAGCGTTGGAAGCTTGCAAACAAGCAATGGTGGGGGATCTGTTGCAATGTCTATTGATAATAGCAGTGTTGGGTCCAATGATTCCCATactcgcattttaaaccaccaAGGGCTACGGAGGCGTGCGAATGATAACTACTCTGTTGCACAGAGTGTCAACCGTAGAGGAAGAGTCACACATGCTCTGAGTGATGATGCTCTGGCTCAAGCACTAATGGACAGTAGTTCCCCAACTGAGGGCCTTGACAATTTTGATGAGTGGACAATTGATTTGAGGAAGCTCAGTATGGGTGAGGCTTTTGCTCAAGGGGCTTTTGGGAAACTCTACAGAGGAACTTACAACTGTGAAGATGTCGCTATCAAAATTTTGGAGAGGCCTGAAAATGATCCATCAAAGGCTCAACTGATGGAACAACAGTTTCAGCAGGAGGTCATGATGCTGGCTACACTGAAACATCCCAACATAGTTCGTTTTATTGGTGCATGCCGCAAGCCAATGGTGTGGTGCATTGTAACAGAGTATGCTAAAGGTGGTTCTGTTCGACAGTTTTTAATGAAGCGCCAAAACCGATCGGTTCCCCTCAAGTTGGCTGTCAAACAAGCTTTGGATGTAGCAAGGGGGATGGCATATGTTCATGGCCTTGGGTTGATCCACAGGGATTTGAAGTCTGACAATCTTTTGATTTTTGGTgataaatcaattaaaattgcTGATTTTGGAGTTGCTCGGATTGAGGTGCAAACTGAAGGAATGACACCTGAGACAGGAACATATCGTTGGATGGCTCCGGAGATGATCCAGCACAGGCCTTACACACAAAAAGTGGATGTATATAGCTTTGGGATTGTCCTTTGGGAACTCATTACCGGAATGCTTCCATTTCAGAACATGACAGCAGTACAAGCAGCATTTGCAGTTGTAAACAAAAATGTTCGGCCAAACATACCCAATGACTGCTTACCTGTTCTCCGCGAGATCATGACAAGGTGCTGGGATCCCAACCCTGATGTTAGACCACCATTTACTGAAATTGTAGAAATGCTTGAGAATGCAGAGACTGAGATCATGACAACTGTTCGCAAGGCTCGTTTTAGGTGTTGCATGACGCAACCCATGACAGCTGATTGA 1251 0.4277 MLEGGAKFPGIIDLNKHNNNYYDFSQGFYHKLEEGTNMSIDSVGSLQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLRRRANDNYSVAQSVNRRGRVTHALSDDALAQALMDSSSPTEGLDNFDEWTIDLRKLSMGEAFAQGAFGKLYRGTYNCEDVAIKILERPENDPSKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKNVRPNIPNDCLPVLREIMTRCWDPNPDVRPPFTEIVEMLENAETEIMTTVRKARFRCCMTQPMTAD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3228 416 SMART serkin_6 135 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3228 416 Gene3D Phosphorylase Kinase; domain 1 124 217 - -
Sto10g3228 416 SUPERFAMILY Protein kinase-like (PK-like) 117 389 IPR011009 -
Sto10g3228 416 Pfam Protein tyrosine and serine/threonine kinase 136 389 IPR001245 GO:0004672|GO:0006468
Sto10g3228 416 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 407 - -
Sto10g3228 416 ProSiteProfiles Protein kinase domain profile. 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3228 416 PANTHER SERINE-THREONINE PROTEIN KINASE 2 407 - -
Sto10g3228 416 Gene3D Transferase(Phosphotransferase) domain 1 218 412 - -
Sto10g3228 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Sto10g3228 416 PRINTS Tyrosine kinase catalytic domain signature 213 226 IPR001245 GO:0004672|GO:0006468
Sto10g3228 416 PRINTS Tyrosine kinase catalytic domain signature 251 269 IPR001245 GO:0004672|GO:0006468
Sto10g3228 416 PRINTS Tyrosine kinase catalytic domain signature 297 307 IPR001245 GO:0004672|GO:0006468
Sto10g3228 416 PRINTS Tyrosine kinase catalytic domain signature 316 338 IPR001245 GO:0004672|GO:0006468
Sto10g3228 416 PRINTS Tyrosine kinase catalytic domain signature 360 382 IPR001245 GO:0004672|GO:0006468
Sto10g3228 416 CDD STKc_MAP3K-like 142 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3228 Sto-Chr10 41420501 41424725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3228 24 416 MAP Kinase Kinase Kinase AT2G24360 80.153 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto10g3228 PK_Tyr_Ser-Thr 2.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3228 - - gmx:100788536 807.749