Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3226 ATGATCCCTTGTTTTCTCGCTCCACCATCGTCCTCATTCTCGAATCTGGGAGCGACTCTTCCACAGAGATTGTTCCATAGgaacaagaagaagaggaagataaACCCGGACCAGTATCTCAGGTCCGGCCGATTGGatgcgggtgaagcagtgataGTGAAGCTCGGGAAGTTGAGGAATGTGGATGGTGATGATGGAGGATATGAATCTGTTACATCAACAACAAAGCAAGATAGAAGTGGAAGCTACACTCCATTATCTCCTATGAATATCAAAGATCTCCGCCAAAGTCCTGGCTATAGGGATGTTGATATATTTGGGTATGATGAGCTGAGGTTGGCCACCAAGCACTTTCGTCCAGACTTAATTCTGGGAGAGGGTGGTTTTGGAGTTGTGTATAAAGGAGTGATAGATGAGAATGTTAGGCCAGGTTACAAGACTACTCAAGTTGCTATTAAGGAGCTAAATCGAGAAGGATTTCAAGGTGATAGGGAATGGCTGGCTGAAGTTAACTATTTAGGTCAATTCAGTCACCCGAATCTTGTGAAGCTTATTGGATATTGCTGTGAGGATGAACACCGGTTGTTGGTCTATGAATACATGGCAAGTGGGAGCTTGGAAAAACATCTTTTTCGCAGAGTGGGCTCAACACTGACTTGGTCAAAGAGAATGAAGATTGCTTTACATGCTGCAAAAGGGCTTGCTTTTCTTCATGGTGCTGAAAGGCCTATCATATATCGTGACTTCAAGACATCAAATATCTTGCTAGATGCGGATTTCAATGCAAAGCTTTCAGACTTCGGTCTTGCAAAGGATGGACCTATAGGCGACCAAACTCATGTTTCAACACGAGTGATGGGCACATATGGATACGCTGCTCCGGAGTATGTGATGACTGGGCATTTAACAGCTCGAAGTGATGTGTATGGTTTTGGAGTGGTGCTACTTGAGTTGCTTATTGGAAGCCGAGCATTAGACAAGAGCAGGCCCAGCAGACAACACAACTTGGTCGAGTGGGCACGTCCATTGTTGAATCATAATAAGAAACTTCTGAAAATTTTAGACCCTAGAATGGAAGGGCAATATTCATCTAGAAGTGCAATAAAGGTGGCGCATCTGGCCAACCAATGTCTTAGCCAAAATCCCAAAGGCAGGCCTCTGATGAGCCAGGTTGTTGAAATTCTTGAAAAATTTCAGTCAAGGGAGGCAAATGAGGAAGAGCAAATGATTCGAAGTGGCAGTAGCGGTATAACCATTTACGAGGTTCCAAAGGACACCGGAGAAACTCCAGTGGGGAAAAAACAACATGAAAGTGATGAGGTTTATAGAAGTAAAGCAAGAGAAAAAAGCAGGAGCGAGCCTTGA 1365 0.4286 MIPCFLAPPSSSFSNLGATLPQRLFHRNKKKRKINPDQYLRSGRLDAGEAVIVKLGKLRNVDGDDGGYESVTSTTKQDRSGSYTPLSPMNIKDLRQSPGYRDVDIFGYDELRLATKHFRPDLILGEGGFGVVYKGVIDENVRPGYKTTQVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAAKGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPIGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGSRALDKSRPSRQHNLVEWARPLLNHNKKLLKILDPRMEGQYSSRSAIKVAHLANQCLSQNPKGRPLMSQVVEILEKFQSREANEEEQMIRSGSSGITIYEVPKDTGETPVGKKQHESDEVYRSKAREKSRSEP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3226 454 SUPERFAMILY Protein kinase-like (PK-like) 99 396 IPR011009 -
Sto10g3226 454 Gene3D Phosphorylase Kinase; domain 1 93 200 - -
Sto10g3226 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Sto10g3226 454 MobiDBLite consensus disorder prediction 64 86 - -
Sto10g3226 454 CDD STKc_IRAK 124 398 - -
Sto10g3226 454 PANTHER OS01G0588500 PROTEIN-RELATED 73 440 - -
Sto10g3226 454 Gene3D Transferase(Phosphotransferase) domain 1 201 436 - -
Sto10g3226 454 MobiDBLite consensus disorder prediction 427 454 - -
Sto10g3226 454 ProSiteProfiles Protein kinase domain profile. 118 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3226 454 Pfam Protein tyrosine and serine/threonine kinase 123 395 IPR001245 GO:0004672|GO:0006468
Sto10g3226 454 ProSitePatterns Protein kinases ATP-binding region signature. 124 153 IPR017441 GO:0005524
Sto10g3226 454 MobiDBLite consensus disorder prediction 405 454 - -
Sto10g3226 454 MobiDBLite consensus disorder prediction 67 86 - -
Sto10g3226 454 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 73 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3226 Sto-Chr10 41383713 41392143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3226 106 395 Glycoside Hydrolase AT3G07070 50.853 1.86e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto10g3226 PK_Tyr_Ser-Thr 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3226 - - gmx:100800465 623.624