Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3225 ATGTCTGAAAGTAAATGTGATGCAACTAGCGAAGCGAGAAGGGAAGGACTTTGTCAACCTCACTCTGTCTGGCTGGTAATTCGTAAACAAGTTCCCTGCTCTGGGTCTTCAGAGCCAGAATTGCTTCTCAAGTTCAAGGAGTCGTTGCAAAACAAAAACGCCACTGTATTTTCCACTTGGAATACATCTACCTCTCCATGTTCGGCTGAGCGTAAGCGTCCCAATTGGGCTGGAGTTTTGTGTAGTGTACAAGGCAAAATTTGGGGGTTGAAACTTGAGAATATGGGGCTGAAAGGGGTGATTGACGTTGACGCCCTTCAGCAACTTCCTAATCTCAGAACCCTAAGCTTCGTCAACAACGATTTCGACACCACTTGGCCAGAATTAAACAAGCTACCGCCTCTCAAgtcattttatctttcaaataaTAAGTTTTCGGGAGAGATTCCTGCTCAAACTTTTCAGGGTATGcattggttgaaaaaaattcatttgtcaAACAATGAGTTTACGGGTGACATTCCAACTTCCTTAACTTTCCTACCCAGGCTTTTGGAGTTGAGGTTGGAAGGCAACAAATTCAGTGGCCGCATTCCCAATTTTCCACACAAGAACCACTTCAATTCTTTTAGCGTAGCTAACAATCAATTGCATGGTAAAATACCAGGCACCCTTAGTACCATGCCAACCTCATCCTTCGCTGGTAACGAAGGCTTATGTGGAACCCCATTGGGTGCATGCCATTCCTCCAAAACCCCCTCAATTATCAGCACTGTGGTAATTGCCATAGTGGTTGGTGTGGCACTAATACTCATTGGGGCCATAATCTTTATCCTTCATCGAAGAAAACGCCCAAAGAAagcagatgatgatgaaggccaAGGGAATAATAGTAATCATCATGATTCCAACCGCAGCAAAAGAGGAGAGAACATGAAGTTGTGTTTTGTGAGGAAAGATAGGGAGATATTTGATTTGCAAGACTTACTAAGAGCCTCTGCTGAAATACTGGGTAGTGGTACCCTCAGTTCTTCCTACAGGGCGGCTTTGTTGAATGGCCCAATCATGGTGGTGAAGAGGTTTAAGCAAATGAACAATGTAGGGAGGGAAGAGTTTCAGGAGCACATGAGGAGGATAGGAAGGTTGGATCATCCTAATTTGCTTCCTCTCGTCGCTTACTATTATAGAAAGGAAGAGAAACTGCTGGTTACAGACTATGTTCGAAATGGGAGCTTGGCccttcaccttcaccttcaAGATCAAGACCTTGATTGGCCAACCCGATTGAAGATTGTCAAAGGCATCACTAAAGGTCTTGAATATCTCTACAAGGAGATGCCAAGCCTAATTGTACCCCATGGACATCTCAAATCCTCAAATGTGCTTCTCACTCAATCTAATTTTGAGCCCCTCTTGAATGACTATAGCTTAGTTCCAGTAATGAATCAAGAGCTTGCTCAGGAGACGTTGGTGATGTTCAGGAGCCCGGAGTATTTACAACACGGTGAGATTACAAAGAAGACGGACATATGGAGTCTTGGGATATTGATTTTGGAGATTTTGAGTGGTAAATTAGGTGGGGAGATGGATATGGTTGAGTGGGTGAATTCAGTGGAGTGGAGTAGGGAGGTGTTTGATAAACAAATGGGGGGAACCAGGAACAGTGAGGGGGAGATGGTGAAGCTTTTGAGGATTGGGTTGGGTTGCTGTGAAGCAGATGTGGACAAGAGGTGGGATTTAAAAGAAGCTGTTGAGAGAATTCTGGAGGTGAAGGAGAGGGATCACGACGATGATTTTTATTCTTCATATGCTAGTGAAGCAGACATGCGATCTTCCAGGGCAATGTCAGATGAAATCAATTTCTCCATAAATTGA 1875 0.4224 MSESKCDATSEARREGLCQPHSVWLVIRKQVPCSGSSEPELLLKFKESLQNKNATVFSTWNTSTSPCSAERKRPNWAGVLCSVQGKIWGLKLENMGLKGVIDVDALQQLPNLRTLSFVNNDFDTTWPELNKLPPLKSFYLSNNKFSGEIPAQTFQGMHWLKKIHLSNNEFTGDIPTSLTFLPRLLELRLEGNKFSGRIPNFPHKNHFNSFSVANNQLHGKIPGTLSTMPTSSFAGNEGLCGTPLGACHSSKTPSIISTVVIAIVVGVALILIGAIIFILHRRKRPKKADDDEGQGNNSNHHDSNRSKRGENMKLCFVRKDREIFDLQDLLRASAEILGSGTLSSSYRAALLNGPIMVVKRFKQMNNVGREEFQEHMRRIGRLDHPNLLPLVAYYYRKEEKLLVTDYVRNGSLALHLHLQDQDLDWPTRLKIVKGITKGLEYLYKEMPSLIVPHGHLKSSNVLLTQSNFEPLLNDYSLVPVMNQELAQETLVMFRSPEYLQHGEITKKTDIWSLGILILEILSGKLGGEMDMVEWVNSVEWSREVFDKQMGGTRNSEGEMVKLLRIGLGCCEADVDKRWDLKEAVERILEVKERDHDDDFYSSYASEADMRSSRAMSDEINFSIN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3225 624 Gene3D Transferase(Phosphotransferase) domain 1 407 610 - -
Sto10g3225 624 ProSiteProfiles Protein kinase domain profile. 331 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3225 624 PANTHER LRR RECEPTOR-LIKE KINASE 33 603 - -
Sto10g3225 624 Gene3D Ribonuclease Inhibitor 33 129 IPR032675 -
Sto10g3225 624 Gene3D Ribonuclease Inhibitor 130 254 IPR032675 -
Sto10g3225 624 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 33 603 - -
Sto10g3225 624 SUPERFAMILY Protein kinase-like (PK-like) 335 589 IPR011009 -
Sto10g3225 624 MobiDBLite consensus disorder prediction 286 307 - -
Sto10g3225 624 Pfam Leucine rich repeat 134 194 IPR001611 GO:0005515
Sto10g3225 624 Pfam Protein kinase domain 334 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3225 624 Gene3D Phosphorylase Kinase; domain 1 296 406 - -
Sto10g3225 624 Pfam Leucine rich repeat N-terminal domain 38 82 IPR013210 -
Sto10g3225 624 SUPERFAMILY L domain-like 37 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3225 Sto-Chr10 41378477 41380499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3225 23 622 Receptor kinase-like Gene Family AT5G35390 50.840 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto10g3225 Pkinase 5.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3225 - - gmx:100804368 713.761