LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto10g3224	ATGTCGAGGCCGATTCCGGAGAAGAAGTTAGGGGCAGGACGTGTGGTGGCTGTGGCAATTGAGAATAACAAGACTAGCCAAAGCGCTGCGAAATGGGCAGTTGACAATCTTCTTCCCAAAGATCAATCTCTCTTGCTAATCCACGTTAAACAAATCGCCGATTGGAACGAAGATGTCGCTCAAGCATGCAATCAAGAAGTCGACAACGAATCGAAAGAGCTTTTCGCTTCATTTCGTGCTTTCTTCAATCGAAAGAATATACATTGCAAAGAAGTGTTGCTGGGGGACACGGATATATGTAAAGCATTAATTGAGAGCGTTTCCACATATTCAATCGAGCTTTTGGTTCTTGGGGCGCCATCAAGGAGTGGCCTTGTGAGAAGATTTAGGGTAACAGATGTTCCAAGCTCTGTGTTAAAAGGGGCGCCTCCATTCTGCACAGTGTATGTTATATCCAAAGGAAAAATCTCAACTACACGATCTGCTACTGCTCCACTTCCATTGCCTGATCGAATGGATGCACAAGCTCAACTGCCACATGACCAAGTACTACCACCACCAGCAGAGAGGCCAGCATATGGGAATGTGACACGCCAGGAATCCGACAAAGATGATTTCAGATCACCGTTCACAAGAGGTAGTAATGCTAAATCATACGAGTCCTCAATCCTCGATTCTGATATATCGTTCGTCAATGGCGGAGGCCCAAGCATGAATCGAATGTTTCCATCATTCTATGATGATATGGAACCTGAAATGACTCCTTGCCCTTCAGCCGCCTCAGATTTCGATGTAAGAAACTACGTATCATTTTCCTCAGCATCCAAATCAAATCATGTAGTCGATGACCTCTCAGTCAGCTCCCAAGAAAATGACATGTCATCCGTGAACACGGATGATGTGGAAGCCGAGATGAGGAGACTTAAGCTAGAACTCAAGCAGACAAAGGAAATGTATAGTACAGCTCGCAAGGAAGCTTTCACGGCAAAGCAGAAGGCAATGGAACTTCAGCGTTGGAAATTGGATGAGCTAAAGAAACTAGAAGAGGCAAAAATAGCTGAAGAAGCCGCTCTATTGATTGCAGAGAAGGAGAAAGCCAAGTGTACAGCTGCATTGGAGGCAGCTGAAGCATCCAAAAAACTTGCAGAACTGGAAGCACAAAAGAGAAAGAGTGCAGAGATCAAAGCCCGGAAAGACATTGAGCGAAAAAAGTCACTAGATACTTTTTCACAAGGTGGTGCGAGGTACAGGAGATACAGTATTGAGGAATTAGAAGAAGCAACACAATGCTTTTCAGAATCTCTGAAGATTGGGGAAGGGGGTTATGGGCCAGTATACAGGTGTCAGTTAGATCACACAGCGGTTGCAGTGAAAGTTTTAAGACCAGATGCAGCGCAAGGACGATCACAGTTTAAGCAGGAGGTGGAAGTTTTAAGCTGCATACGACATCCAAACATGGTTCTACTGCTAGGAGCATGCCCAGAGTATGGTTGCTTAGTATATGAGTACATGGCTAATGGAAGCTTGGAAGACTGCCTCTTTCGGAAAGGAAACACGCCGGTTCTTCCGTGGCAGCTAAGATTCATAATAGCTGCAGAGATTGGGACAGCATTACTTTTTCTTCATCAAACAAAACCAGAACCCATTGTTCACCGTGATTTAAAACCTGGCAACATATTGCTTGACCGTAACTATGTGAGTAAAATTAGTGATGTGGGATTGGCAAGGCTTGTCCCTCCTTCCGTTGCAGACACAGTAACTCAGTATCGCATGACATCAACTGCTGGGACATTTTGCTACATTGATCCCGAGTACCAGCAAACGGGAATGCTTGGAATCAAATCTGATATATATTCACTTGGGATCATGTATTTGCAACTAATAACAGCTAAGTCACCAATGGCTTTGACTCATCATGTTGCGCGAGCTATTGAGAAGGGCACTTTTCGTGAGATGCTTGACCCAGCTGTTGAGGACTGGCCAGTTGAGCAATCCTTGCAGTTTGCAACCCTTGCTCTACAATGTGCAGAAATGAGGAAAAAAGATAGGCCTGACCTTGGCACTGTAGTATTACCTCAGCTCAATAAACTCAGAGCATTTGCTGAAGACAACATCGTGCCTTTCATGGTCTTTGGAAAAACTACACGTTCCACTCCCAGAACCAACGCCATTTCCTCAAATTCCAACTTCAACTGA	2196	0.4467	MSRPIPEKKLGAGRVVAVAIENNKTSQSAAKWAVDNLLPKDQSLLLIHVKQIADWNEDVAQACNQEVDNESKELFASFRAFFNRKNIHCKEVLLGDTDICKALIESVSTYSIELLVLGAPSRSGLVRRFRVTDVPSSVLKGAPPFCTVYVISKGKISTTRSATAPLPLPDRMDAQAQLPHDQVLPPPAERPAYGNVTRQESDKDDFRSPFTRGSNAKSYESSILDSDISFVNGGGPSMNRMFPSFYDDMEPEMTPCPSAASDFDVRNYVSFSSASKSNHVVDDLSVSSQENDMSSVNTDDVEAEMRRLKLELKQTKEMYSTARKEAFTAKQKAMELQRWKLDELKKLEEAKIAEEAALLIAEKEKAKCTAALEAAEASKKLAELEAQKRKSAEIKARKDIERKKSLDTFSQGGARYRRYSIEELEEATQCFSESLKIGEGGYGPVYRCQLDHTAVAVKVLRPDAAQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRKGNTPVLPWQLRFIIAAEIGTALLFLHQTKPEPIVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMYLQLITAKSPMALTHHVARAIEKGTFREMLDPAVEDWPVEQSLQFATLALQCAEMRKKDRPDLGTVVLPQLNKLRAFAEDNIVPFMVFGKTTRSTPRTNAISSNSNFN	731

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto10g3224	731	Gene3D	Phosphorylase Kinase; domain 1	411	503	-	-
	Sto10g3224	731	Gene3D	Transferase(Phosphotransferase) domain 1	504	706	-	-
	Sto10g3224	731	Coils	Coil	298	325	-	-
	Sto10g3224	731	Gene3D	HUPs	13	151	IPR014729	-
	Sto10g3224	731	Coils	Coil	374	394	-	-
	Sto10g3224	731	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	549	561	IPR008271	GO:0004672\|GO:0006468
	Sto10g3224	731	MobiDBLite	consensus disorder prediction	196	210	-	-
	Sto10g3224	731	CDD	STK_N	15	154	-	-
	Sto10g3224	731	PANTHER	ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE	1	730	-	-
	Sto10g3224	731	SUPERFAMILY	Protein kinase-like (PK-like)	412	690	IPR011009	-
	Sto10g3224	731	MobiDBLite	consensus disorder prediction	179	217	-	-
	Sto10g3224	731	Pfam	Universal stress protein family	14	143	IPR006016	-
	Sto10g3224	731	SMART	serkin_6	431	694	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto10g3224	731	PANTHER	OS02G0152300 PROTEIN	1	730	-	-
	Sto10g3224	731	ProSiteProfiles	Protein kinase domain profile.	431	709	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto10g3224	731	Coils	Coil	344	364	-	-
	Sto10g3224	731	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	16	151	-	-
	Sto10g3224	731	Pfam	Protein kinase domain	433	685	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto10g3224	Sto-Chr10	41374814	41377556	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto10g3224	7	725	Receptor kinase-like Gene Family	AT1G78940	53.743	0.0	715

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Sto10g3224		Pkinase	9.9e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto10g3224	-		-	gmx:100803837	928.317