Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3214 CTGGCAGATGATTCCCGGGAGAAGCTGCTAGTGGTACAAGTGCACGAGAGCGAGGATATCCATCACCGTTACAACCATCCCAAATTTCAGATTCGAAATCTCACCAAAGTTTCCGATGCCGGAGCTCCCATTCTCAAGGGCATCAACTTGGACATACCAAAGGGCATCATCCTGGGCGTCATTGGGCCTAGTGGTAGCGGCAAATCCACCTTCCTCAGGGCCTTGAACCGCCTTTGGGAGCCACCCTCCCGTACCGTCTTCTTTGACGATTCCGATATCTGCGATCTCGATGTTCTCTCCCTCCGCCGTAAGGTCGGCATGCTCTTTCAGCTCCCTGCCCTCTTTCAAGGCACGGTCGCAGACAATGTGCGGTATGGACCACAATTAAGAGGTAAAAGGCTAACCGAGGAAGAGGTGTGCAAGTTGCTCATAACTGCGGACCTTGATGCTTCTTTCATGAATAAGAATGCTACTGAACTCTCTGTGGGTCAAGCTCAAAGAGTAGCACTTGCCAGGACTTTAGCTAATTCACCTGAGGTTTTACTGCTGGATGAGCCAACTAGTGCGTTAGATCCAATATCCACAGAAAACATAGAGGATGCCATAGTGAAGCTGAACAAGAATGAAGGCATGACCGTGATAATGGTCTCCCATAGCGTTAAACAAATACAGAGAATAGCTGACTTGGTGTGCTTACTTGTTGATGGTGAAGTTGTTGAAGTTCTAAAGCCTGATCAACTCTCACAAGCCGACCATCCCATGGCTCAAAGGTTTCTTCAACTCAGTTCCTAG 792 0.4874 LADDSREKLLVVQVHESEDIHHRYNHPKFQIRNLTKVSDAGAPILKGINLDIPKGIILGVIGPSGSGKSTFLRALNRLWEPPSRTVFFDDSDICDLDVLSLRRKVGMLFQLPALFQGTVADNVRYGPQLRGKRLTEEEVCKLLITADLDASFMNKNATELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDAIVKLNKNEGMTVIMVSHSVKQIQRIADLVCLLVDGEVVEVLKPDQLSQADHPMAQRFLQLSS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3214 263 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 6 263 IPR005670 GO:0005315|GO:0016020|GO:0035435
Sto10g3214 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 249 IPR027417 -
Sto10g3214 263 Gene3D - 26 262 IPR027417 -
Sto10g3214 263 ProSitePatterns ABC transporters family signature. 160 174 IPR017871 GO:0005524
Sto10g3214 263 CDD ABC_PstB_phosphate_transporter 29 247 IPR005670 GO:0005315|GO:0016020|GO:0035435
Sto10g3214 263 Pfam ABC transporter 45 188 IPR003439 GO:0005524
Sto10g3214 263 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 6 263 - -
Sto10g3214 263 SMART AAA_5 54 237 IPR003593 -
Sto10g3214 263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 260 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3214 Sto-Chr10 41292141 41293338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3214 44 261 Calmodulin-binding Proteins AT2G36910 31.304 8.02e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3214 K02068 - gmx:100791365 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3214 10 41292141 41293338 Sto10g3214 10 41292141 41293338 ECH