Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3206 ATGGTAAGAAAGTGCTCGCATTGCGGGAAAATAGGGCATAATTCTAGGACTTGCACATCTTTGAGAGGATTACGCCTCTTTGGTGTTCAACTAGATGCATCCTCATCTTCTGTTACTATTCCCATCAAGAAAAGCTTGAGCATGGAGTCTTTGCCATCATCatcagcatcatcatcatcctcatcctcatcctcatttTGTCATTCATCTGATCACAGAGCCTCAGTAGGTTATGTCTCAGATGGTCTTATAGATGCAGCACAAGACAGAagaaaagGAGTGGCATGGACAGAAGAGGAGCACAGAAGATTCCTGATAGGACTTGAGAAACTGGGAAAAGGGGATTGGAGAGGAATCTCTAGAAACTATGTGACCACAAGAACCCCAACTCAAGTGGCTAGTCATGCTCAAAAATACTTTCTTCGCCTCTCATCCATCAACAACAAGAAGACACGTTCAAGTCTCTTTGACATGGTGTGTAGCAACAGCAAGAGGGAAGAGGATAATGATAAACATTCCATTGATGATGCAGAAGAGAAGACGATGTGGCTACAATATTCTCACACCAACACTACTTTGCCTGATCTCAATCTCACTCTTGCTCTTCCACCTGCCCCAACAATTAGCGTCACttaa 636 0.4057 MVRKCSHCGKIGHNSRTCTSLRGLRLFGVQLDASSSSVTIPIKKSLSMESLPSSSASSSSSSSSSFCHSSDHRASVGYVSDGLIDAAQDRRKGVAWTEEEHRRFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLSSINNKKTRSSLFDMVCSNSKREEDNDKHSIDDAEEKTMWLQYSHTNTTLPDLNLTLALPPAPTISVT 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3206 211 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 142 IPR006447 GO:0003677
Sto10g3206 211 Pfam Myb-like DNA-binding domain 95 140 IPR001005 -
Sto10g3206 211 Gene3D - 94 147 - -
Sto10g3206 211 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 183 - -
Sto10g3206 211 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Sto10g3206 211 ProSiteProfiles SANT domain profile. 96 144 IPR017884 -
Sto10g3206 211 PANTHER TRANSCRIPTION FACTOR KUA1 1 183 - -
Sto10g3206 211 SMART sant 92 142 IPR001005 -
Sto10g3206 211 CDD SANT 95 140 IPR001005 -
Sto10g3206 211 ProSiteProfiles Myb-like domain profile. 88 140 IPR001005 -
Sto10g3206 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 144 IPR017930 -
Sto10g3206 211 SUPERFAMILY Homeodomain-like 90 145 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3206 Sto-Chr10 41250240 41251075 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto10g3206 Myb_DNA-binding 2.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3206 - - gmx:778052 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3206 10 41250240 41251075 Sto10g3206 10 41250240 41251075 ECH