Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3204 ATGGTAGCGGGAGATCTGTGCTCAGTCATCCCTAGGCTGAAGAGGGAAGAATGTAAACGAACAAAACACGATCCCAACTTCTCTGATTGGAAGATTCTCATTGGCCCTTCTGATTGGGAGGACTATTCAAAAGGGAAGGAAGGATCAGCTAAATACAGAATTCATAACCTCCCAGAAAAATCTGTCCCAGGAGTATATGAGCTTGGTATTGCTGTATTTCACAGTGGTTTAGGGCGTAAAATTAACAAGCTTGACCCAGACCATATAGTGGTCGTCTACCTTGGAGAGGCTGACAATGTGAGAACCCGACTTCAGCGTTATGGCCGAACTGGAGCTCATTTGGGTAATAGCTGTTCAAGTTATGACCCAGATGATTGTTATCCTGCTTCTATCCAAAAAGGGGTGGGGTTGTTTGAGGAGATATTTTCACAAGGCTATCCAATTATTTATAGATGGGCTCCTATGCAAAACAAGGAAGATGCCAAGAAAACAGAAAGTCAGTTGCTCAGTGTATTTGATTATGCGTGGAACACAAGCAATAATGGTTCACGGCGCCCTGATGATATTCTTCAAAAGCTTAAAAAGATTTCTTCTGGTCCCAGATCATTTTCAAATATGGCAAGGGTGCTTCTACCTTTCACTCAGAAGAAAGTGGGTATCCAAATTAAGTCATGCAACCTGCCTCCACCCAATGACAAGTTACATGAAATAGATGAAGGCAGCTATAATTTCTTATCTCGAGTATTTAAATTTAACAGATCAACTCCTAGGATAGTGCAGGAGAATAATACTAGATTTTGTGGAGTGGCCTTGGGTGATGGTTCTGTTTGTAGAAGACCACCAGCTGAAAGAAGACTGAGGTGTTCTGAACACAAAGGAATGAGAACAAATGGGGCCACTGCCAAAACTATCAGGGAAATGAAATCAGAGACAACTCTGGACCTAAACAACAATGTAAATTGTCAAAAAATGGGCAAAGACTATGGTGAACAAAATGTCAGCCTTGATGTGGTAGACCTTCCAAAAGCAGCAGTTGAGAGTACTCTTGATGAAAGCATCACCAATATATGTGGAATCATATTGAATGATGGCACCCCTTGTAGAACACCACCAGTTAAAGGGAGAAAAAGGTGCCATGAGCACAAAGGGAAGAGAATTCATGTATCTATGCATAAACCAGTGATAGTTGGAAATTCACAATTTCTTAAAAGCGCAATTTCAGAACAAACAGCACTTGAGGGTCCTCTTGATGAGACCACCATTGCCAATACATGTGGAATCATTCTGAATGATGGCTCCCCTTGCAGAAGACCGCCAGTTAAAGGGAGAAAAAGCCTCATAGAGGATCCTGTTTTAGGTGATGGATTTTGCTGTACAACTCAATCTGTTAGAAGACAGGTAATCTATGAGAAGCACTACGTGATGAGAACCCCTTCATGGAAGGAAGATGGGTGA 1455 0.4179 MVAGDLCSVIPRLKREECKRTKHDPNFSDWKILIGPSDWEDYSKGKEGSAKYRIHNLPEKSVPGVYELGIAVFHSGLGRKINKLDPDHIVVVYLGEADNVRTRLQRYGRTGAHLGNSCSSYDPDDCYPASIQKGVGLFEEIFSQGYPIIYRWAPMQNKEDAKKTESQLLSVFDYAWNTSNNGSRRPDDILQKLKKISSGPRSFSNMARVLLPFTQKKVGIQIKSCNLPPPNDKLHEIDEGSYNFLSRVFKFNRSTPRIVQENNTRFCGVALGDGSVCRRPPAERRLRCSEHKGMRTNGATAKTIREMKSETTLDLNNNVNCQKMGKDYGEQNVSLDVVDLPKAAVESTLDESITNICGIILNDGTPCRTPPVKGRKRCHEHKGKRIHVSMHKPVIVGNSQFLKSAISEQTALEGPLDETTIANTCGIILNDGSPCRRPPVKGRKSLIEDPVLGDGFCCTTQSVRRQVIYEKHYVMRTPSWKEDG 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3204 484 Pfam GIY-YIG domain-containing protein 27 190 - -
Sto10g3204 484 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 7 318 - -
Sto10g3204 484 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 310 446 - -
Sto10g3204 484 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 7 318 IPR038909 GO:0003677|GO:0006355
Sto10g3204 484 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 310 446 IPR038909 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3204 8 476 HRT Transcription Factor Family AT5G56780 36.811 3.32e-91 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Sto10g3204 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3204 - - lang:109350609 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3204 10 41238543 41240821 Sto10g3204 10 41238543 41240821 ECH