Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3174 ATGCCAAATTTTCATTATACTTTCttacttgttcttcttcttcttctgcaaaATCATCCTTCTCTAACATTATGCCATACCAAGGGGATTCGACCCAGGCGTTTTCCTGGGGTCGGATTATCCATCAACATGACCCGAGTCCAGACATCAGAACAGCAATTCATGAAATGGGTTGATTTTGTGGGTAGCCTCAAACACTCTGTTTTCAAGACAGCAAAAAACAAGCTTTTTCCATCTTACACTTTGCACGTCGATAAGAACCCTTTGATCGGAGATTTCTCCACCATTCAAGAAGCCATTGATTCCCTTCCTTCACTCAATCTCGTGAGAGTGGTCATAAAGGTGCATGCAGGGGTTTACACGGAGAAAGTTAATATCCCTCCTTTTAAATCCTTCATAACAATAGAAGGAGATGGAGCAGATAACACCATAGTTGAATGGGGTGACACGGCTCAAACACCTGGACCAAAGGGACAACCATTGGGAACATATGGTTCAGCAACATTTGCAGTGAATGCACCCTATTTCATTGCCATGAACATCACTTTCAAAAACACAACCCCAGTTCCTCCACCGGGAGCAGTAGGGAAGCAAGCAGTGGCATTGAGAATTTCAGCAGACACAGCAGCATTCGTGGGATGCAAATTCCTAGGAGCACAGGACACATTGTATGACCATGTGGGAAGGCATTACTACAAAGATTGTTACATAGAAGGGTCGGTTGATTTCATATTCGGGAACGCCCTGTCTCTGTATGAGGGATGTCACGTGCATGCCATAGCACGAAACACAGGGGCAGTAACAGCACAAGGAAGGAGCAGCATATTGGAGGACACGGGGTTCTCATTTGTGCACTGTAAGGTCACGGGGTCAGGGGCACTATACCTTGGAAGGGCTTGGGGTCCCTTTTCTCGCGTGGTCTTTGCTTACACTTACATGGACAACATCATCATTCCCAAGGGCTGGTATAACTGGGGAGACCCTAACCGTGAAATGACTGTGTTTTATGGACAGTACAAATGCACAGGACAAGGAGCTAGCTTCGCGGGCAGAGTATCGTGGTCAAGAGAACTCACTGATGAGGAAGCTAAACCTTTTCTTTCACTTACCTTCGTTGATGGTTCTGAATGGATCAAAATCTAG 1143 0.4471 MPNFHYTFLLVLLLLLQNHPSLTLCHTKGIRPRRFPGVGLSINMTRVQTSEQQFMKWVDFVGSLKHSVFKTAKNKLFPSYTLHVDKNPLIGDFSTIQEAIDSLPSLNLVRVVIKVHAGVYTEKVNIPPFKSFITIEGDGADNTIVEWGDTAQTPGPKGQPLGTYGSATFAVNAPYFIAMNITFKNTTPVPPPGAVGKQAVALRISADTAAFVGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIARNTGAVTAQGRSSILEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGQGASFAGRVSWSRELTDEEAKPFLSLTFVDGSEWIKI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3174 380 Pfam Pectinesterase 91 374 IPR000070 GO:0030599|GO:0042545
Sto10g3174 380 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 379 - -
Sto10g3174 380 PANTHER PECTINESTERASE 7 379 - -
Sto10g3174 380 ProSitePatterns Pectinesterase signature 2. 237 246 IPR033131 -
Sto10g3174 380 Gene3D - 78 380 IPR012334 -
Sto10g3174 380 SUPERFAMILY Pectin lyase-like 77 379 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3174 Sto-Chr10 41046729 41049300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3174 3 378 Carbohydrate Esterase AT5G47500 44.180 7.25e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3174 K01051 - gmx:100793314 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3174 10 41046729 41049300 Sto10g3174 10 41046729 41049300 ECH