Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3173 ATGGGAAGGGCTACGAGGTGGTTGAAGAACTTGTTTGGGATAAGGAGAGACAAAGACAAAAAAGAGAATCCAGCTTCAAACTCCGACCACCGTAAGAACATGACATCTTCATCAGCACCACCACCCAACATTTCACCTGCAGAGGCTGCGGCTGTGGCAGTGGTCAGGCTGACCAGCCAAGGCAGAGGCACCATGTTCGCCGGCGCTGGACACGAAAAATGGGCCGCCGTCAAGATTCAAACCGTATTCAGAGGATTCttgGCAAGGAAAGCACTGAGAGCCCTGAAAGGATTAGTGAAGATACAAGCACTAGTGAGAGGATTTCTAGTTCGTAAGCAAGCAACGGCAACTTTACACAGTATGCAAGCTCTTATGAGAGCTCAAGCCACAGTTCGTTCTCATAAAGATCGTGGGGAAGCATGTAGATTCGAAACGCGAGCACGAAGATCCATGGAGAGATTTGATGAGAGTAGACGGCTATCATCTTCTTTCGATGCTACAATCGAAGGAAGCCCAAAGATAGTGGAAGTGGACACAGGTTGCCGGCCGAAATCGAGGTGTCGCCTGTCAATGTCGGATTTCGGCGACGACCCACAATTCCAAACGGTGTCGTCTCCACTCCCAATCCGTCAAATTCGAACACCTGCAGCGAAGGTGGATGGAAGGGTTATGCGGGAAACAGAGTGGGGGCTAACAGTAAGTGGGGAAGAATTGAGATTCTCCACGGCACAGAGCACTCCGCGCTTCGCGAATTCTTGCTCTGTTGCGACACCGAAGAGTGTTTGTGCAGAGAGATTGTTGTGGCATTATGGGGATTGTCCGAATTACATGGCGAATACGCAATCTTTCAAGGCGAAGTTGAGGTCTAGAAGTGCACCGAAACAGAGGCCGGAATTAGGAGGAGGCGTGAAGAAGAGGCTTTCGCTGAATGAAATGATGGAGTCGAGGAGTAGTTTGAGTGGGGTTCGAATGCAGAGGTCATGCTCGCAGGTCCAGGATGCGATTAATTTCAAGAATGCTGTGATGGGTAAGCTTGAGAGAAGCACAGATAGAGATGGTTATTACTTGCAGAGGaggtggtga 1083 0.4922 MGRATRWLKNLFGIRRDKDKKENPASNSDHRKNMTSSSAPPPNISPAEAAAVAVVRLTSQGRGTMFAGAGHEKWAAVKIQTVFRGFLARKALRALKGLVKIQALVRGFLVRKQATATLHSMQALMRAQATVRSHKDRGEACRFETRARRSMERFDESRRLSSSFDATIEGSPKIVEVDTGCRPKSRCRLSMSDFGDDPQFQTVSSPLPIRQIRTPAAKVDGRVMRETEWGLTVSGEELRFSTAQSTPRFANSCSVATPKSVCAERLLWHYGDCPNYMANTQSFKAKLRSRSAPKQRPELGGGVKKRLSLNEMMESRSSLSGVRMQRSCSQVQDAINFKNAVMGKLERSTDRDGYYLQRRW 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3173 360 ProSiteProfiles IQ motif profile. 72 100 IPR000048 GO:0005515
Sto10g3173 360 MobiDBLite consensus disorder prediction 29 43 - -
Sto10g3173 360 Gene3D - 73 112 - -
Sto10g3173 360 Pfam Protein of unknown function (DUF4005) 250 330 IPR025064 -
Sto10g3173 360 PANTHER IQ-DOMAIN 5-RELATED 47 349 - -
Sto10g3173 360 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 47 349 - -
Sto10g3173 360 MobiDBLite consensus disorder prediction 16 45 - -
Sto10g3173 360 ProSiteProfiles IQ motif profile. 96 123 IPR000048 GO:0005515
Sto10g3173 360 SMART iq_5 71 93 IPR000048 GO:0005515
Sto10g3173 360 SMART iq_5 94 115 IPR000048 GO:0005515
Sto10g3173 360 Pfam IQ calmodulin-binding motif 99 113 IPR000048 GO:0005515
Sto10g3173 360 Pfam IQ calmodulin-binding motif 74 93 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3173 Sto-Chr10 41042794 41044139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3173 1 324 IQD Protein Family AT3G16490 43.041 1.70e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3173 - - tcc:18588500 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3173 10 41042794 41044139 Sto10g3173 10 41042794 41044139 ECH