Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3170 ATGACAAATTCTACTCCATTTTACTTCCTCCTTGTCTTTATCCTCTTCCTGGGCTATGCAAACTCTCAGTCTGAACTCTATGATCAAGAGCATGCAATCCTATTGAAGCTCAAAGAGTATCTGCAAAATCCATCTTTTCTGAGTCATTGGACTCCATCAAATTCCTCCCATTGTTCTTGGCCAGAGATTCAATGCTCCAGCACCCCCATTAATGGCTCTGTCATTGGACTCTATCTGATTAACACCAACATCACCCAAGAAATCCCATCTTTTCTCTGTGACCTCAAAAACCTCACTACCATTGAATTTCAGTGGAATTACTTACCTGGGGAATTCCCTACATCTCTCTACAACTGCTCCAAGCTGGAGTACTTGGACCTCTCCAATAATTACTTTGTTGGTAAGATTCCAGATGACATTGACCGATTGGCTAACCTGCAATTTCTTAGCCTTAATGGCAACAACTTCTCCGGCGACATTCCGGCGAGCATTGGACGGTTAAAGGAGCTAAGAACTCTTCAACTTAGTTATTGTCTATTTAATGGCACATATCCAGATGAAATAGGCAATTTGTCCAATCTTgaagtcttatatatatatcaaaacagATTACTCCTCCCTTCAAAGTTTCCATCCAGCTTCATCCAGCTGAAGAATATGAAGGATTTTCAGATGTTTGAGTCCAACTTGATAGGTGAAATCCCAGAAAACATCGGAGAAATGGTGGCTTTAGAGCAGTTGGATTTATCAGTAAATAATTTAACTGGGCAAATTCCCAATGGATTGTTTATGCTGACGAATCTGAGCATACTGTATCTCTTTAAGAATAATCTTTCCGGGGAGATACCTGAAGTGGTTGAAGCTTTAAACCTCACCATCCTTGATCTTTCAGAGAACAATCTCTCTGGGAAAATACCTGAAGCTTTTGGAAATCTCCATAAGTTAACAGGTTTAAACTTGGGTCTTAATCACTTTTCAGGTGAGATGCCAGAAAGCCTAGGTCGTCTTCCATCCATTATAGACTTTGGTgtcattttcaacaatttatcagGTACTGTTCCTCCTGAGTTTGGACTCCATTCACCTCTTAGAAGATTTGAGATTGCATCAAACAGTTTCACAGGAAGGCTACCTCAGAACTTATGCTATTATGGTAATTTATTTCGAATAACTGCTTATAACAACAAACTAGATGGGGAATTTCCAGAATCACTAGGAAATTGTAGTACCCTGATAGAGTTGAGGGTCAACCAGAATGAGCTTTCTGGCAACATTCCTAGTGGCCTCTGGGCATCTCAGAACTTGTCAACTTTAATGATCAATGAGAATAAGTTGACAGGTGAACTTCCTGAAACATTGCCTAGGAATGTTTCACTCTTGGCCATTAGTTACAATCAGTTCTCTGGTTCAATCCCAGCAGGAATATCTTCCATGATAAATCTGGTGGTGTTCAATGCCAGTAAAAACCTGTTTAATGGAAGTATTTCACAAGAGCTAACAAGCCTTTCCCAGCTAACAAATCTATTGCTTGATCGAAACCAGTTTTCGGGGTCACTTCCATCTGAATTTATATCATGGAAGTCTCTAAAAGAGTTAAACTTGAGCCAAAATCAGCTTTCTGGAGAAATCCCAGATGCACTTGGTCGTTTACCTGTCCTCTCACAACTAGACTTGTCAGAAAATCAATTCTCTGGTCAAGTTCCATCTGAACTTAGCCATTTGCCAATCACAAACTTTAATCTTTCCTCCAATCATTTGACAGGGAGGATCCCTAGTGGATTCGAAAATCTCATTTATGCCAACAGCTTTTTGAACAATTCTGGTCTCTGCTCTGATATGGCAGGACTAAACGTTACCTTATGCAATTCTGGTTCTGGCTCTCAACAACAGTCAAGCAAGGGTTCATCTGTGTCTCTTGCTTTGATCATAGGCCTGGCAGTAGTAGCCTTCATAGCTGCTTTCTTGCTGTTACTTTTCATAATCAGAGTGTACCGAAGAAGAAAGCAACAATTGGACACTTCATGGAAGCTGACTTCCTTTCAGAGGCTGAGTTTTACAGAATCAAACATTGTGTCATCCATGACAGACCAAAACATCATAGGCAGAGGTGGGCATGGGACAGTGTACCGTGTGGCTGTGGCTCTTATAGGCTATGTTGCTGTGAAAAAGATATGCAGTAATAGGAAGTTAGATCAGAAGCTTGAGAATGCATTTCTTGCAGAAGTGGAAATTTTGAGCTCCATTCGTCATACCAACATAGTGAAGCTCTTGTGCTGTATATCTAATGGGGATTCCATGCTTCTTGTGTATGAATATATGGATAATCGTAGCCTTGATCGGTGGCTACACAAGAAGAGGGTTTCATTACCTGTCGTGTCAGGTTCAGTCCCTAATGATGTTCTTGATTGGCCAAAGAGATTGCATATAGCCATTGGAGCTGCACAAGGTCTGAGCTACATGCACCATGATTGCTCACCACCCATTATTCATCGTGATGTGAAAACAAGCAACGTTCTTTTGGATTCTATGTTCAATGCAAAAGTTGCAGACTTTGGTCTAGCCAGGATATTGGACAAGCCAGGTGAACTTGATACCATGTCAGCTGTGGTTGGCTCTTTTGGTTATATTGCTCCAGAGTATATTCAAACAACCAGAATCAATGAAAAGATTGATGTGTATAGCTTTGGGGTTGTGCTATTGGAGCTAACTACTGGAAAAGAAGCCAACTATGGAGATGAACACTCATCTCTTGCAGAATGGGCATGGCGTCACGTGCAGGTTGGTGGAGATGTAGAAGACATTCTAGACAAAGAGATTAAGGAAGCATGCTATATGGATGCAATGTGCAGTGTCTTCAAACTTGGGGTGATGTGTACTGCAACACTGCCCGCTAGTAGGCCCTCCATGAAGGATGTGTTGCAAAGGCTGCTTCGTTGCGGGGATCCATTTGGCTTCGGAGATAATAAGAAAGTGGGAATCTTTGAAGTTGTTCCTCTCCTTAAGAATTCAAAGAGGGAGAGTAGGTTGGATATTGATGATTAA 3042 0.4073 MTNSTPFYFLLVFILFLGYANSQSELYDQEHAILLKLKEYLQNPSFLSHWTPSNSSHCSWPEIQCSSTPINGSVIGLYLINTNITQEIPSFLCDLKNLTTIEFQWNYLPGEFPTSLYNCSKLEYLDLSNNYFVGKIPDDIDRLANLQFLSLNGNNFSGDIPASIGRLKELRTLQLSYCLFNGTYPDEIGNLSNLEVLYIYQNRLLLPSKFPSSFIQLKNMKDFQMFESNLIGEIPENIGEMVALEQLDLSVNNLTGQIPNGLFMLTNLSILYLFKNNLSGEIPEVVEALNLTILDLSENNLSGKIPEAFGNLHKLTGLNLGLNHFSGEMPESLGRLPSIIDFGVIFNNLSGTVPPEFGLHSPLRRFEIASNSFTGRLPQNLCYYGNLFRITAYNNKLDGEFPESLGNCSTLIELRVNQNELSGNIPSGLWASQNLSTLMINENKLTGELPETLPRNVSLLAISYNQFSGSIPAGISSMINLVVFNASKNLFNGSISQELTSLSQLTNLLLDRNQFSGSLPSEFISWKSLKELNLSQNQLSGEIPDALGRLPVLSQLDLSENQFSGQVPSELSHLPITNFNLSSNHLTGRIPSGFENLIYANSFLNNSGLCSDMAGLNVTLCNSGSGSQQQSSKGSSVSLALIIGLAVVAFIAAFLLLLFIIRVYRRRKQQLDTSWKLTSFQRLSFTESNIVSSMTDQNIIGRGGHGTVYRVAVALIGYVAVKKICSNRKLDQKLENAFLAEVEILSSIRHTNIVKLLCCISNGDSMLLVYEYMDNRSLDRWLHKKRVSLPVVSGSVPNDVLDWPKRLHIAIGAAQGLSYMHHDCSPPIIHRDVKTSNVLLDSMFNAKVADFGLARILDKPGELDTMSAVVGSFGYIAPEYIQTTRINEKIDVYSFGVVLLELTTGKEANYGDEHSSLAEWAWRHVQVGGDVEDILDKEIKEACYMDAMCSVFKLGVMCTATLPASRPSMKDVLQRLLRCGDPFGFGDNKKVGIFEVVPLLKNSKRESRLDIDD 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3170 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Sto10g3170 1013 Gene3D Ribonuclease Inhibitor 26 205 IPR032675 -
Sto10g3170 1013 Pfam Leucine rich repeat 503 563 IPR001611 GO:0005515
Sto10g3170 1013 Pfam Leucine rich repeat 98 156 IPR001611 GO:0005515
Sto10g3170 1013 Pfam Protein kinase domain 696 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3170 1013 ProSiteProfiles Protein kinase domain profile. 694 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3170 1013 Gene3D Transferase(Phosphotransferase) domain 1 773 982 - -
Sto10g3170 1013 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 1007 - -
Sto10g3170 1013 SUPERFAMILY L domain-like 32 288 - -
Sto10g3170 1013 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 1007 - -
Sto10g3170 1013 Gene3D Phosphorylase Kinase; domain 1 665 772 - -
Sto10g3170 1013 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Sto10g3170 1013 SMART LRR_typ_2 502 525 IPR003591 -
Sto10g3170 1013 SMART LRR_typ_2 191 217 IPR003591 -
Sto10g3170 1013 SMART LRR_typ_2 143 167 IPR003591 -
Sto10g3170 1013 SMART LRR_typ_2 312 336 IPR003591 -
Sto10g3170 1013 SMART LRR_typ_2 241 265 IPR003591 -
Sto10g3170 1013 SMART LRR_typ_2 550 574 IPR003591 -
Sto10g3170 1013 SMART LRR_typ_2 290 311 IPR003591 -
Sto10g3170 1013 SMART serkin_6 694 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3170 1013 ProSiteProfiles Leucine-rich repeat profile. 528 551 IPR001611 GO:0005515
Sto10g3170 1013 Gene3D Ribonuclease Inhibitor 206 340 IPR032675 -
Sto10g3170 1013 Gene3D Ribonuclease Inhibitor 341 617 IPR032675 -
Sto10g3170 1013 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Sto10g3170 1013 SUPERFAMILY RNI-like 290 598 - -
Sto10g3170 1013 SUPERFAMILY Protein kinase-like (PK-like) 685 977 IPR011009 -
Sto10g3170 1013 CDD STKc_IRAK 700 978 - -
Sto10g3170 1013 Pfam Leucine Rich Repeat 290 312 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3170 Sto-Chr10 41019741 41029280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3170 30 980 Receptor kinase-like Gene Family AT5G25930 51.983 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto10g3170 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3170 - - gmx:100785907 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3170 10 41019741 41029280 Sto10g3170 10 41019741 41029280 ECH