Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3165 ATGCACTCATCATCGTTCATCTCAGGGATTGCATTCTCCACGTACTTCTCATGGAGGCTAGCATTAGTGTCATACCCAACACTGCTTCTTCTGATAATCCCAGGAATGCTATATGGGAAATACCTAACCTACTTGTCAAACAAGTCGAGGAAGGAGTATGGGAAGGCAAACGCCATTGTAGAACAAGCTCTAAGCTCAATTAAGACGGTGTATTCATTCACTGCAGAGAGAAGAATAATGGAGAGGTATTCAAGAATATTGGAGAGAACTTCAAGGCTTGGAATGAAGCAAGGAATAGCAAAAGGTGTGGCTGTGGGAAGCACAGGTTTGTCTTTTGCAATATGGGCTTTTCTGGCTTGGTATGGGAGTCGCTTGGTTATGTACAAAGGTGAAAGTGGAGGAAGGATTTATGCAGCTTCCATTTGCTTCATCATGAGTGGActATCCCTTGGAGTGGCACTTCCTGAACTAAAGTACTTTACAGAATCATCCATTGCTGCTTCAAGAATATTCCACATGATTGACCGAATACCAAGAATAGATAGTGAAGACACAAGAGGACAAACATTAGAGTACATGAGTGGCAATCTAGAATTTGAGCATGTCCAGTTCACATACCCTTCTCGTCCAGATTCAATGGTTCTTAAGGATTTCAACCTTCAAGTTGAATCTGGGAAAACTGTTGCTCTTGTTGGTGCAAGTGGGAGTGGTAAGTCCACTGCAATAGCATTAGTGCAACGATTCTATGATGCAGATGAAGGTGTTGTGAGGGTTGATGGTGTAGACATAAGAAATCTACAGTTGAAATGGATAAGAGGCAAAATGGGACTTGTGAGTCAAGAGCCTGCACTTTTTGGGACTTCTATAAAGGAGAATATTATGTTTGGGAAGCCTGATGCTACAATGGATGAAGTTGTTGCTGCAGCCACAGCAGCCAATGCTCATAACTTCATAAGGCAGCTTCCTCAAGGTTATGAGACTAAGATTGGAGAAAGAGGGGCACTTCTATCAGGTGGACAAAAGCAAAGAATAGCAATTGCAAGAGCCATCATAAAAAACCCTGTGATTCTGTTACTTGATGAAGCAACTAGTGCTCTTGACTCTGAATCAGAACTGCTGGTTCAGAATGCCCTTGATCAGGCCTCCATGGGAAGGACCACATTGGTTGTTTCCCACAAGCTATCCACCATTCGAAATGCAGACCTCATAGCAGTGGTAAGTGGTGGCTGCATCATTGAAACTGGTACTCACAATGAACTCATGAACCACACAAATGGCCATTATTCAAAACTAGCAAAATTACAAAGGCAATTCAGCTGTGAAGATCAAGAACAAAACCTTGAACTGACTACTTCTTGTGTAGCAACAAGAAGTAGTGGCGGTAGACCAAGTACTGCAAGATCAAGCCCACCCATCTTCCCAAAATCACCATTGCCTGATACTATTATTCCATCACTTGACCTCTCTAATTACCCTCCACCTTCTTTATCAAGGCTTCTTTCTCTGAATGCCCCAGAGTGGAAACAAGGTCTGGTTGGAAGTCTCTCAGCTATAGCCTTTGGCTCCATTCAACCTATATATGCCTTAACCATTGGGGGTATGATTTCTGCATTTTTTGTTGAAAGCCATGAAGAAATGCGTCATAGGATCAGAACttactcttttattttctcttcccTATCCCTTGCTTCTATAATCCTCAATCTGTTACAACACTACAATTTTGCTTATATGGGAGAGAAGTTAACAAAGAGAGTCAGACTAAGAATGCTAGAGAAGATCCTGACCTTTGAAACTGCTTGGTTTGATGAGGAACAAAACTCTAGTGGAGCCCTATGCTCAAGGTTGAGCAATGAGGCTTCCATGGTTAAGTCACTTGTTGCAGATAGATTGTCTTTAATAGTTCAAACCACTTCTGCTGTCACAATCGCTATGATCATAGGACTTGTTGTGGCTTGGAAGCTTGCTGTTGTTATGATAGCTGTGCAGCCTCTCACAATACTTTGCTTCTACACAAGAAAAGTTCTGCTTTCCACACTTTCAACAAATTTTGTTAAGGCTCAGAATCATAGCACACAAATTGCAGTGGAAGCTGTTTATAATCACAAAATAGTGATTTCATTTGGAAGTAACAGGAAAGTTGTACAACTATTTGATGGAGCTCAAGAGGCACCCAGGAAGGAAGCCAGAAAGAAGTCGTGGCTAGCTGGGATTGGGATGGGTTCGGCTCAATGCCTAACCTTCATGTCATGGGCTTTAGATTTCTGGTTTGGTGGGAAATTGGTGCAAAAGGGAGAAATATCAGCAGGTGATGTGTTCAAGACTTTCTTTGTATTGGTGAGCACAGGGAAGGTCATAGCTGAAGCTGGAAGCATGACTTCTGATCTTGCCAAGACCTCAGCAGCAGTGGCATCTGTGTTTGGGATTCTTGACCGCCAATCACTCATTCCTAAGAGTGGAGATGGCACAAGTGGGTGTAAGTTGGAGAAGATGAGTGGGAAGATAGAGATGAAGAACGTAGATTTTAGGTACCCAAGCAGGAGAGGGAGTCCAATATTGCGCAAGTTTTGCATGGAGGTGAAGGCAGGAAGAAGCATAGGAGTAGTGGGGAAAAGTGGATGTGGGAAATCAACAGTCATAGCTTTAATCCAAAGATTCTACGACGTAGAGGGAGGAAGCATCAAGGTGGACGGAGTGGACATTAGGGAATTGGACATTCAATGGTACAGACAACACACGGCGCTTGTAAGCCAAGAGCCGGTCATCTATTCAGGAACCATACGCGACAACATTGTGTTTGGGAAGGAAGACGCTCACGCTTCAGAGAGTGAAGTAGTGGAAGCTGCAACAGCTGCCAATGCCCATGACTTCATCTCATCACTGAAAGATGGGTATGAAACAGAATGTGGAGAAAGGGGAGTACAACTATCAGGAGGGCAGAAGCAGAGAATAGCAATGGCAAGAGCTATAATTCGGAACCCAAGGATTCTACTTTTGGATGAAGCCACCAGTGCTCTGGACGTACAATCAGAAAGAGTAGTGCAAGATGGTCTTGACAGAATAATGGTAGGCAGAACCACCATTGTGGTGGCTCATAGGCTTCACACCATCAAACACCTTCACTCTATTGCCTACGTTTCAGATGGAAAGCTTCTTGAACAAGGAACCTATGCACAGCTTTTCCACAACAAAGGCCCATTCTTCAACCTAGCCACTCATCAAACTTCAACCTGA 3234 0.431 MHSSSFISGIAFSTYFSWRLALVSYPTLLLLIIPGMLYGKYLTYLSNKSRKEYGKANAIVEQALSSIKTVYSFTAERRIMERYSRILERTSRLGMKQGIAKGVAVGSTGLSFAIWAFLAWYGSRLVMYKGESGGRIYAASICFIMSGLSLGVALPELKYFTESSIAASRIFHMIDRIPRIDSEDTRGQTLEYMSGNLEFEHVQFTYPSRPDSMVLKDFNLQVESGKTVALVGASGSGKSTAIALVQRFYDADEGVVRVDGVDIRNLQLKWIRGKMGLVSQEPALFGTSIKENIMFGKPDATMDEVVAAATAANAHNFIRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDQASMGRTTLVVSHKLSTIRNADLIAVVSGGCIIETGTHNELMNHTNGHYSKLAKLQRQFSCEDQEQNLELTTSCVATRSSGGRPSTARSSPPIFPKSPLPDTIIPSLDLSNYPPPSLSRLLSLNAPEWKQGLVGSLSAIAFGSIQPIYALTIGGMISAFFVESHEEMRHRIRTYSFIFSSLSLASIILNLLQHYNFAYMGEKLTKRVRLRMLEKILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRLSLIVQTTSAVTIAMIIGLVVAWKLAVVMIAVQPLTILCFYTRKVLLSTLSTNFVKAQNHSTQIAVEAVYNHKIVISFGSNRKVVQLFDGAQEAPRKEARKKSWLAGIGMGSAQCLTFMSWALDFWFGGKLVQKGEISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKTSAAVASVFGILDRQSLIPKSGDGTSGCKLEKMSGKIEMKNVDFRYPSRRGSPILRKFCMEVKAGRSIGVVGKSGCGKSTVIALIQRFYDVEGGSIKVDGVDIRELDIQWYRQHTALVSQEPVIYSGTIRDNIVFGKEDAHASESEVVEAATAANAHDFISSLKDGYETECGERGVQLSGGQKQRIAMARAIIRNPRILLLDEATSALDVQSERVVQDGLDRIMVGRTTIVVAHRLHTIKHLHSIAYVSDGKLLEQGTYAQLFHNKGPFFNLATHQTST 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3165 1077 Gene3D ABC transporter type 1, transmembrane domain 3 748 IPR036640 GO:0005524|GO:0016021
Sto10g3165 1077 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 511 798 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g3165 1077 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 835 1073 IPR003439 GO:0005524
Sto10g3165 1077 CDD ABC_MTABC3_MDL1_MDL2 198 435 - -
Sto10g3165 1077 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 197 433 IPR003439 GO:0005524
Sto10g3165 1077 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 5 162 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g3165 1077 SUPERFAMILY ABC transporter transmembrane region 498 811 IPR036640 GO:0005524|GO:0016021
Sto10g3165 1077 MobiDBLite consensus disorder prediction 454 478 - -
Sto10g3165 1077 Gene3D - 825 1077 IPR027417 -
Sto10g3165 1077 Pfam ABC transporter 215 364 IPR003439 GO:0005524
Sto10g3165 1077 Pfam ABC transporter 856 1004 IPR003439 GO:0005524
Sto10g3165 1077 CDD ABC_6TM_Pgp_ABCB1_D2_like 500 816 - -
Sto10g3165 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 827 1074 IPR027417 -
Sto10g3165 1077 Pfam ABC transporter transmembrane region 515 781 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g3165 1077 Pfam ABC transporter transmembrane region 4 132 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g3165 1077 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1074 IPR039421 -
Sto10g3165 1077 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 1 1074 - -
Sto10g3165 1077 CDD ABC_MTABC3_MDL1_MDL2 835 1074 - -
Sto10g3165 1077 ProSitePatterns ABC transporters family signature. 336 350 IPR017871 GO:0005524
Sto10g3165 1077 SMART AAA_5 862 1056 IPR003593 -
Sto10g3165 1077 SMART AAA_5 224 478 IPR003593 -
Sto10g3165 1077 MobiDBLite consensus disorder prediction 454 469 - -
Sto10g3165 1077 Gene3D - 195 448 IPR027417 -
Sto10g3165 1077 SUPERFAMILY ABC transporter transmembrane region 5 181 IPR036640 GO:0005524|GO:0016021
Sto10g3165 1077 ProSitePatterns ABC transporters family signature. 976 990 IPR017871 GO:0005524
Sto10g3165 1077 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 170 - -
Sto10g3165 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 435 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3165 Sto-Chr10 40980097 40986343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3165 16 436 Calmodulin-binding Proteins AT2G36910 41.274 1.26e-92 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3165 K05658 - gmx:100819207 1730.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3165 10 40980097 40986343 Sto10g3165 10 40980097 40986343 ECH