Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3157 ATGGCTGAGCTTCCAGCCTCagatgcttcttcttcttcgtcttcgtcttcttcttcttcctccacagAGCACAGGAAGCCCAAGCGAGGCAGAGACAGAGACAGCGGGAACAGCAAGCATCCTGTGTACAGAGGAGTTCGAATGCGCACTTGGGGGAAATGGGTTTCGGAAATCCGCGAGCCCAAGAAGAAGAATCGGATCTGGCTCGGCACTTTCGCTACTCCCGAGATGGCCGCGCGTGCTCACGACGTCGCCGCCCTTGCTATTAAGGGCAACTCCGCCATCCTCAACTTCCCTGACCTTGCCGCTTCTCTGCCCCGACCCGCTTCCAACTCCCCCCGAGATGTTCAGGATGCTGCTTCCAAAGCCGCTTCCATGGACGTCTTCAATatcactactactactactcccGCAACCACGTCGtcgtcttcgtcttcttcttcctcctccggAGATGCTTCCAGTTCAGCACCAGAGGAGGAGCTGGGTGAGATAGTGGAGCTTCCGTCGCTGGGTACAAGTTTCGATGAACCCGACCCGAGTACCGATTTTGTGTATTTTGACCCGGTAGATGGGTGGCTCTATCCTCACCCGTGGTATcacagtggtggtggtgggtattTCATAGGGGATCACTTATCAATGCAGGAAGAAGCAGAGAGGAATTTGCGGCAACAATTGAGTTGGAGTTaa 693 0.4589 MAELPASDASSSSSSSSSSSSTEHRKPKRGRDRDSGNSKHPVYRGVRMRTWGKWVSEIREPKKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPDLAASLPRPASNSPRDVQDAASKAASMDVFNITTTTTPATTSSSSSSSSSSGDASSSAPEEELGEIVELPSLGTSFDEPDPSTDFVYFDPVDGWLYPHPWYHSGGGGYFIGDHLSMQEEAERNLRQQLSWS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3157 230 MobiDBLite consensus disorder prediction 134 156 - -
Sto10g3157 230 MobiDBLite consensus disorder prediction 134 161 - -
Sto10g3157 230 MobiDBLite consensus disorder prediction 22 40 - -
Sto10g3157 230 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Sto10g3157 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 229 - -
Sto10g3157 230 MobiDBLite consensus disorder prediction 1 46 - -
Sto10g3157 230 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Sto10g3157 230 MobiDBLite consensus disorder prediction 1 21 - -
Sto10g3157 230 Pfam AP2 domain 41 91 IPR001471 GO:0003700|GO:0006355
Sto10g3157 230 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Sto10g3157 230 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Sto10g3157 230 CDD AP2 43 101 IPR001471 GO:0003700|GO:0006355
Sto10g3157 230 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Sto10g3157 230 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Sto10g3157 230 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 10 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3157 Sto-Chr10 40926436 40928306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3157 1 207 AP2-EREBP Transcription Factor Family AT5G11590 55.660 5.33e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto10g3157 AP2 7.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3157 K09286 - gmx:100804801 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3157 10 40926436 40928306 Sto10g3157 10 40926436 40928306 ECH