Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3114 ATGCCGCGATCTAATTCGGCGGTGCACCATCAGCGTCAGAATTCTGATAACTTTCTTGAGACAACTTCTCGTGGAAGATGGTTTCAATCGTCTACTTCGACGCAGGGATTTGATAGGTATCGATCTTCTAGCTTGAGGAAGAACGATGACGATCAAGTCTTGCCCGGTGGGTTTACTCATGGCCTTCTTGATCTGCATTCCTTCAATACTGAGCTTTTACCTGAGATGTCTAACATTGGCGATGAGTATTTAACCAATTATCCTGTTCGTGGTCGGGGATTGCCTGAGAACAGTATTCTTAAAAGTCTCTCAACGGATAAAGAGAGAGCAAACAGTGTTGCTAAGATCAAAGTTGTGGTTCGCAAGAGACCActaaataagaaagaaatagcaaagaaagaggaagataTTATCACCATAGATTCAAATGCTCTCACAGTTCATGAAAGGAAACTCAAGGTTGACTTAACTGAATATATTGAGAAACATGAATTTGTTTTTGATGCTGTGCTCAATGAAGATGTTTCAAACAATAAAGTGTATTCCGAGACAGTGGAACCCATTGTTCCTCTTATTTTCCAACGAACGAAAGCAACGTGCTTTGCATATGGCCAAACAGggaGTGGGAAGACTTATACTATGCAACCACTGCCTCTCAAAGCATCccaagatattttaaaattaatgcacCATACGTACTGGAACCAAGGTTTCCAATTGTTTGTTAGTTTCTTCGAGATATATGGGGGGAAACTATTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGACGGGAAACAACAGGTTTGCATTGTTGGCTTGCAAGAATACAAGGTTTCTAATGTTGAGACCATCAAGGACTTGATTGAGAAAGGGAACGCTACAAGAAGTACTGGTACAACTGGTGCAAATGAGGAATCTTCTCGATCACATGCTATACTTCAGCTTTGTATCAAGAGATCAGCTGATGGGACTGAATCGAAGCCTGCTCGAGTTGTTGGCAAGCTCTCTTTTATAGATCTTGCTGGAAGTGAACGTGGTGCTGATACTACAGATAACGATAAGCAGACAAGGATTGAAGGTGctgaaataaataaaagcttACTTGCTTTGAAAGAATGCATCAGAGCCCTCGACAATGACCAGGGACATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTGCTCCGAGATTCTTTTGTTGGTGATTCACGCACTGTTATGATATCATGCATTTCACCGAGCTCAGGTTCTTGCGAGCATACTCTGAACACACTAAGATATGCTGACAGGGTGAAGAGTCTGTCAAAAGGGAACAGCTCCAGAAAGGATGCCATTCCCTCATCTTCAAACCTTAGAGAGTCAACCACATTGCCTCCGTCTTTATCTTATGAGGATACCTTTGAGgatgaaataaattatgttcCCAGTGAAAAGAACAGGTTTGGTTGGTCCAAACAGGTTGAAAGAGAGCCCTCTCCTCCAATTAATATGGATCGTGTTCCCAGTGGTCGGATGGGGGGAAATTCGGCCACATCTATTTTTTCAGACTCACAAAGGGGCCATAGAGCTGGTCAAAATGACAAAGCTGAAAATGAAGCTGATTACCTAAAGCCTACAACTTATGAACAAGACAGAACAAGAAAGATCAGTAAGAAAGTAGATAGCAGTAGATTAGCTACTGTGGAGGACAAGATAGACTCCCGTGTGAAACATATGGATCTTCCCAAGGCCAATAATCCTGATAATGATTTAAACGCCCTGTTAAAGGAAGAGGAAGATCTCGTAACAGCTCATAGGAGACAAGTGGAGGAGACAATGGACATTGTCAGGGAGGAGATGAATCTACTGGTTGAGGCTGACCAACCTGGAAATCAACTAGATGATTATATTACCAAACTGAATGCCATTTTGTCACAGAAAGCTTCAGGAATTCTTCAATTGCAGACACAGTTGGCTCAATTTCAGAAACGTTTGAAAGAGTACAATGTTTTGGTATCTTCTGGTAATTAA 2022 0.4006 MPRSNSAVHHQRQNSDNFLETTSRGRWFQSSTSTQGFDRYRSSSLRKNDDDQVLPGGFTHGLLDLHSFNTELLPEMSNIGDEYLTNYPVRGRGLPENSILKSLSTDKERANSVAKIKVVVRKRPLNKKEIAKKEEDIITIDSNALTVHERKLKVDLTEYIEKHEFVFDAVLNEDVSNNKVYSETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILKLMHHTYWNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYKVSNVETIKDLIEKGNATRSTGTTGANEESSRSHAILQLCIKRSADGTESKPARVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRKDAIPSSSNLRESTTLPPSLSYEDTFEDEINYVPSEKNRFGWSKQVEREPSPPINMDRVPSGRMGGNSATSIFSDSQRGHRAGQNDKAENEADYLKPTTYEQDRTRKISKKVDSSRLATVEDKIDSRVKHMDLPKANNPDNDLNALLKEEEDLVTAHRRQVEETMDIVREEMNLLVEADQPGNQLDDYITKLNAILSQKASGILQLQTQLAQFQKRLKEYNVLVSSGN 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3114 673 ProSitePatterns Kinesin motor domain signature. 337 348 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sto10g3114 673 SMART kinesin_4 113 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g3114 673 MobiDBLite consensus disorder prediction 442 466 - -
Sto10g3114 673 PRINTS Kinesin heavy chain signature 195 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g3114 673 PRINTS Kinesin heavy chain signature 304 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g3114 673 PRINTS Kinesin heavy chain signature 338 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g3114 673 PRINTS Kinesin heavy chain signature 388 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g3114 673 Coils Coil 648 668 - -
Sto10g3114 673 MobiDBLite consensus disorder prediction 439 466 - -
Sto10g3114 673 MobiDBLite consensus disorder prediction 1 24 - -
Sto10g3114 673 ProSiteProfiles Kinesin motor domain profile. 115 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g3114 673 MobiDBLite consensus disorder prediction 489 557 - -
Sto10g3114 673 PANTHER KINESIN-RELATED PROTEIN 6 40 671 - -
Sto10g3114 673 Pfam Kinesin motor domain 121 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g3114 673 PANTHER KINESIN-LIKE PROTEIN 40 671 - -
Sto10g3114 673 Coils Coil 603 623 - -
Sto10g3114 673 MobiDBLite consensus disorder prediction 525 557 - -
Sto10g3114 673 CDD KISc_KIF2_like 115 436 - -
Sto10g3114 673 Gene3D Kinesin motor domain 96 441 IPR036961 -
Sto10g3114 673 MobiDBLite consensus disorder prediction 509 524 - -
Sto10g3114 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3114 Sto-Chr10 40621632 40626361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3114 114 438 Calmodulin-binding Proteins AT5G65930 34.627 4.39e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3114 K10393 - gmx:100783382 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3114 10 40621632 40626361 Sto10g3114 10 40621632 40626361 ECH