Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3106 ATGGCAACTCCCTCTAATGCACACTCTGTTTCCTCCTTCAACATTCCAACAGTCAAGTTCACCAAGCTTTTCATCAATGGACATTTCGTTGATTCCATTTCAGgaAAAACATTTGAGAGTGTAGACCCAAGAACAGGGGATGTGATTACAGAAATAGCAGAGGGTACTAAAGAAGACGTTGATCTCGCAGTGAAGGCAGCACGGAACGCATTCGATTCTGGTCCATGGCCACGCATGAGCGGCTCTGAGAGAGCGAGGATTATGATGAGATGGGCAGATCTGATTGAAGAGAACAAAGAGGAAGTAGCTGCGTTAGACACCATTGATGGAGGTAAGCTATACAGATGGTGTACGGATGTGGATGTTCCTCATGTGGTTAGTATTCTAAGATACTATGCTGGTGCTGCTGATAAGATTCATGGAGAGGTATTGAAAAGTTCAAGGAATCTCCATGCGTATACGTTGATGGAGCCCATTGGGGTAGTTGGGCACATTATCCCATGGAATTTTCCTTCCATCTTGTTCTTCGCCAAGGTCAGCCCTGCCTTGGCTGCTGGATGCACTATGGTTGTTAAGCCTGCTGAGCAAACGCCTCTCTCTGCTCTCTTTTATGCTCACCTTTCTAAGCTGGCTGGTATCCCTGATGGGGTACTCAATGTGGTACCTGGGTTTGGCCAATCAGCTGGTGCTGCAATAAGCTCCCACATGGACATTGACACGGTCAGTTTTACTGGTTCAACAGAAACGGGTAGTCAAGTGATGCAGGCAGCAGCAAGGAGTAATTTGAAACCAGTTTCACTGGAATTAGGAGGCAAGTCACCCCTCATAGTTTTCGATGATGCTGATGTTGATATAGCTGTTGATCTTGCCCTATTTGGAATCCTAGCCAACAAGGGAGAGATTTGTGTTGCGAGTTCCAGAGTTCTTGTTCAGGAAGGGATTTATGAGAAATTTGAGAAGAAGGTGGTGGAGAAAGCAAAAGCTTGGGTAGTAGGGGATCCTTTTGATCCTAAAGTTCAGCAAGGACCTCAGGTTGACAAGAagcaatttgataaaattatttcatGTATTGAGCATGGAAAGAGAGAAGGAGCCACCCTGTTGACTGGTGGTAAGCCAGTGGGCAATAAGGGATACTACATTCAACCTACAATTTTCACCCATGTTAAGGAAGACATGGTAATAGCACAAGATGAAATATTTGGACCTGTGATGGCACTCTTTAAGTTCAAGACCGTTGAGGATGCAATTAGGAGTGCAAATAATACTAGATATGGCCTAGCAGCTGGAATTGTGACAAAGAACTTGGATATAGCCAACACAGTCTCACGGTCTATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTTGCCTTTGATTGTGATTGCCCTTATGGAGGGTACAAGATGAGTGGATTTGGAAGAGATTACGGACTTCATGCCCTTCACAAGTACCTTCAAGTTAAATCTGTTGTAACTCCTATATATAATTCTCCTTGGCTTTGA 1506 0.4389 MATPSNAHSVSSFNIPTVKFTKLFINGHFVDSISGKTFESVDPRTGDVITEIAEGTKEDVDLAVKAARNAFDSGPWPRMSGSERARIMMRWADLIEENKEEVAALDTIDGGKLYRWCTDVDVPHVVSILRYYAGAADKIHGEVLKSSRNLHAYTLMEPIGVVGHIIPWNFPSILFFAKVSPALAAGCTMVVKPAEQTPLSALFYAHLSKLAGIPDGVLNVVPGFGQSAGAAISSHMDIDTVSFTGSTETGSQVMQAAARSNLKPVSLELGGKSPLIVFDDADVDIAVDLALFGILANKGEICVASSRVLVQEGIYEKFEKKVVEKAKAWVVGDPFDPKVQQGPQVDKKQFDKIISCIEHGKREGATLLTGGKPVGNKGYYIQPTIFTHVKEDMVIAQDEIFGPVMALFKFKTVEDAIRSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIVWINCYFAFDCDCPYGGYKMSGFGRDYGLHALHKYLQVKSVVTPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3106 501 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 4 501 - -
Sto10g3106 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Sto10g3106 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Sto10g3106 501 SUPERFAMILY ALDH-like 14 497 IPR016161 GO:0016491
Sto10g3106 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
Sto10g3106 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 501 - -
Sto10g3106 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Sto10g3106 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3106 Sto-Chr10 40584695 40587785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3106 8 501 Aldehyde Dehydrogenase Gene Family AT3G24503 69.697 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3106 K12355 - gmx:100783920 827.009