Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3103 ATGGACGACATTGGGGACGATACAAGGTACCCTCCAAAGCCCTACGGTTCGAACCGTCCTAACACTTCTCATCGTCAGGAACATTTGATTCGAGCTGCCCCTCATCATCGCCAAGTGATTCCTCGATATGAGGAAGACGATGAAGATGAAGAGATGGATGAATATGATATGGGTAATGACCAAGAGGACGATGATGGTGACGGGGTAAATCGCTACGGTGTGAATTTCGAGGACGATGACGAGTTTGGAAGGAACCCGAAGAAGAGGAGGTTTAGGAATTCTTCTGTTTCGAACTATGATGCAGTAGCTCGTGCGAAATATTCATATGGGAATCGAAGTTCAGCTGATGACTGGACAGAGCATGCGACATTTGTGCTATTAGAGGTTTGGGGGGATAAATTTCTTCAACTTGGGAGGAAGAGTTTAAGGTCCGAGGATTGGCATGATGTAGCCGAGAAGGTTTCAGAGGAGATGAAGGTTGACAGAACAGAAGCCCAGTGTAGGAATATGTTGGACAAACTGAAACGAAGGTACAAGAAAGAAAAGGCAAAAATGGATGAAATGGGGTTGAATTCTAGCAAATGGGCTTATTTCAAGAAGATGGATATGTTGCTGGCCTCATCAGCGAGACAAGAATATGGGCTTGCCTGTGGGATTGATTCTGGGGAGTATGTGTTCATGAATACAAGGGTTTATCTGAACCGGTCGAATGGGTATGATGAGATGAGAGATAGCCCTGGGGAATCAGAGACTTCTGAAGAGAATGATTCGGATGGGTTCCCCCCGAGGAGGACAGGGATTGAAGGcaatgaggaggaggaggagtctTCCTTTAGGGAGTTGGCGGATTCTATTCAAAAGTTTGGTAAAATATATGAGAAAATTGAGAATAGTAAGAGGCGGCAGATGATGGAGTTGGAGAAGATGAGGCTGGATTTTAATAGGGAGTTGGAGCTGCAGAAGAAGCAGATTCTTGAAAGGGCTCAGGCCGAAATTGCTAATTTGCAGGAAGGAGATGAAGAGGACACAGAGGAATCTACAGAGAATGACAGTGAATGA 1059 0.4419 MDDIGDDTRYPPKPYGSNRPNTSHRQEHLIRAAPHHRQVIPRYEEDDEDEEMDEYDMGNDQEDDDGDGVNRYGVNFEDDDEFGRNPKKRRFRNSSVSNYDAVARAKYSYGNRSSADDWTEHATFVLLEVWGDKFLQLGRKSLRSEDWHDVAEKVSEEMKVDRTEAQCRNMLDKLKRRYKKEKAKMDEMGLNSSKWAYFKKMDMLLASSARQEYGLACGIDSGEYVFMNTRVYLNRSNGYDEMRDSPGESETSEENDSDGFPPRRTGIEGNEEEEESSFRELADSIQKFGKIYEKIENSKRRQMMELEKMRLDFNRELELQKKQILERAQAEIANLQEGDEEDTEESTENDSE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3103 352 MobiDBLite consensus disorder prediction 335 352 - -
Sto10g3103 352 Coils Coil 292 345 - -
Sto10g3103 352 MobiDBLite consensus disorder prediction 241 272 - -
Sto10g3103 352 MobiDBLite consensus disorder prediction 1 89 - -
Sto10g3103 352 Pfam Myb/SANT-like DNA-binding domain 116 203 IPR044822 -
Sto10g3103 352 MobiDBLite consensus disorder prediction 238 279 - -
Sto10g3103 352 Gene3D - 118 180 - -
Sto10g3103 352 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 38 347 IPR044823 -
Sto10g3103 352 MobiDBLite consensus disorder prediction 64 88 - -
Sto10g3103 352 MobiDBLite consensus disorder prediction 24 43 - -
Sto10g3103 352 MobiDBLite consensus disorder prediction 44 63 - -
Sto10g3103 352 Coils Coil 164 191 - -
Sto10g3103 352 MobiDBLite consensus disorder prediction 330 352 - -
Sto10g3103 352 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 38 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3103 Sto-Chr10 40568497 40569555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3103 116 341 Trihelix Transcription Factor Family AT1G54060 30.970 1.06e-21 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto10g3103 Myb_DNA-bind_4 3.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3103 - - gmx:100778031 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3103 10 40568497 40569555 Sto10g3103 10 40568497 40569555 ECH