Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3101 ATGACTTCCCTCAGCAATTCCATCAACCCCATCGACGCCGGCGGCGGCAATGGCGGAGACGGGCGGCACGCGGTGAGCTTCGCGGCGCCGAGAGGGTTCGGGACGAAACTAAAATCGGCAGTGAAAGAAACACTTTTCCCAGACGACCCTTTCCGTGAGTTGAAGAATGAAGAGAAAGCCAGGGGCAAAATAGTAAAAGGCTTCCAATATTTCGTGCCTATCTTCGAATGGCTTCCCTCTTACAACTTGCGTCTCTTCTTCCGTGACTTCCTCGCCGGCCTCACCATCACCAGCCTCGCCATCCCTCAAGGCATTAGCTACGCTAAACTCGCCGACATTCCTCCCATCAACGGCCTCTATAGTAGTTTTGTGCCGCCGCTGGTGTATGCAATTTTTGGGAGTTCGAGACACGTGGCAGTGGGGACGGTGGCGGCGGCGTCATTGCTTTTATACCAAACTATTTCCAGCGTGGTGAATCCGGAAGATGATCCTGCGTTGTATCTTCATTTGGTTTTCACGGCTACCTTCATCACTGGGATTTTCCAGACTGCTTTAGGTGTTCTAAGGTTGGGGATATTGGTGGATTTCTTTTCTCATTCTACAATCACTGGGTTCATGGGAGGGACGGCGGTAATACTGTGCCTTCAACAACTAAAGGGCGTGTTTGGTCTGAAACATTTCACCACTAAAACAAGTGTGGTGGCAGTGGTCAAGGCCATCTGGACCAATAGGAACGAgaagaagaaaaatcCGAAACTATTTTTGGTTTCGGCAGTGGCCCCAATAACAACAGTGATAATTGGCGCTGTGGGTCACCTAGATCGAGGATTAAATCATCTTTCCATCCACTATTTCAATTTCGATCCTAAATATTTACCGACAGTGTTGAAAGCTGGCATTATCACAGGCATATTGTCTTTGGCGGAAGGGATAGCAATAGGAAGAAGCTTTGCCGTGGCCGAAAATACCCCTCATGATGGGAACAAGGAAATGGTTGCCTTTGGTTTAATGAATCTGTGTGGCTCTTTCACTTCATGCTACTTGACTAGTGgaCCATTCTCGAAGACGGCGGTGAATTACAACGCAGGGTGTAAGACAGCGATGTCGAACATAGTACAAGGAGCGTTCATGGCACTGACACTACTATTTTTGGCTCCATTGTTTGGTTACACGCCTCTCGTGTCTCTTTCTGCTATTATAATGTCTGCCATGTTGGGCCTTATTGACTACGAAGAGGCAATTCGTCTCTTCAAGGTCGACAAGTTTGACTTCCTTATTTGCATCTCTTGCTTCCTGGGCGTCACCTTCATTTCCATGGACGTTGGCCTCTTCTTGTCCATTGGACTTGGTGTGCTTAGAGGAGTGTTATACGTGGCAAGACCAGCCCCATGTAAACTTGGAAAGTTACCACACTCATCTCTATACAGAGACATGGAGCAATATCCAACAACTCCCACAATTCCAGGTGTTTTAATCATTCAGCTTGGTTCTCCTCTCCACTTTGCAAATTCTTCCTACGTCAAAGATAGGATCATGAGGTATATTCAAACTGAAGAGAGCTCCAACATAGAAAATAACGTAGAGCATATCATACTCGATTTATCAGGAGTAACATCCATTGATGTAACTGCTATTGATGGATTATTGGAGATACGTAAAATCTTAGGAAAAAATGGAAAGCAGCCTCTCAGGCTTGAAATCAAGCGTGATCCTGTATCAACATATCTTGATAGTGGAAGTCCGGCTGATGGTCAAGGTGCCGAAGATGCATTTGAACTACTTCATGAAATAAATGAGCTAGTCAAAGCTGGAATATGGGTTGGTGACTGTTTTATTTACAATAACTCTTCTTTGAAGCTCAACTACTGCGTTGGTGTGGCCAAAGATCTTGACTACAGATTTGATCTTGCTTTGCAGCTTAGCAGAGTAGACATTGCAGAGGACATTGCTATTGAGGCTCAAAGTCACACCAAATGGAAGCAACTAGGAGAATTAGCTTTGTCTTCTGGGAAGATAAGCAAAAGAGCAGCAGAAACTTTGGTtgatcctgaggaagatcctaACCTCCTTGAGGACTGGCACATTGCTCTAGACATCGAATCAAAAGTTGCATAA 2115 0.4487 MTSLSNSINPIDAGGGNGGDGRHAVSFAAPRGFGTKLKSAVKETLFPDDPFRELKNEEKARGKIVKGFQYFVPIFEWLPSYNLRLFFRDFLAGLTITSLAIPQGISYAKLADIPPINGLYSSFVPPLVYAIFGSSRHVAVGTVAAASLLLYQTISSVVNPEDDPALYLHLVFTATFITGIFQTALGVLRLGILVDFFSHSTITGFMGGTAVILCLQQLKGVFGLKHFTTKTSVVAVVKAIWTNRNEKKKNPKLFLVSAVAPITTVIIGAVGHLDRGLNHLSIHYFNFDPKYLPTVLKAGIITGILSLAEGIAIGRSFAVAENTPHDGNKEMVAFGLMNLCGSFTSCYLTSGPFSKTAVNYNAGCKTAMSNIVQGAFMALTLLFLAPLFGYTPLVSLSAIIMSAMLGLIDYEEAIRLFKVDKFDFLICISCFLGVTFISMDVGLFLSIGLGVLRGVLYVARPAPCKLGKLPHSSLYRDMEQYPTTPTIPGVLIIQLGSPLHFANSSYVKDRIMRYIQTEESSNIENNVEHIILDLSGVTSIDVTAIDGLLEIRKILGKNGKQPLRLEIKRDPVSTYLDSGSPADGQGAEDAFELLHEINELVKAGIWVGDCFIYNNSSLKLNYCVGVAKDLDYRFDLALQLSRVDIAEDIAIEAQSHTKWKQLGELALSSGKISKRAAETLVDPEEDPNLLEDWHIALDIESKVA 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3101 704 Gene3D STAS domain 460 598 IPR036513 -
Sto10g3101 704 PANTHER SULFATE TRANSPORTER 21 247 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto10g3101 704 PANTHER SULFATE TRANSPORTER 247 558 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto10g3101 704 CDD STAS_SulP_like_sulfate_transporter 481 561 - -
Sto10g3101 704 Pfam Coatomer WD associated region 582 625 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Sto10g3101 704 Pfam Coatomer WD associated region 626 673 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Sto10g3101 704 Gene3D - 624 679 - -
Sto10g3101 704 ProSiteProfiles STAS domain profile. 480 559 IPR002645 -
Sto10g3101 704 Pfam STAS domain 481 559 IPR002645 -
Sto10g3101 704 Pfam Sulfate permease family 86 246 IPR011547 GO:0016021
Sto10g3101 704 Pfam Sulfate permease family 267 428 IPR011547 GO:0016021
Sto10g3101 704 SUPERFAMILY SpoIIaa-like 481 564 IPR036513 -
Sto10g3101 704 PANTHER SULFATE TRANSPORTER 3.5-RELATED 21 247 IPR030316 GO:1902358
Sto10g3101 704 PANTHER SULFATE TRANSPORTER 3.5-RELATED 247 558 IPR030316 GO:1902358
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3101 Sto-Chr10 40543241 40554281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3101 23 561 Inorganic Solute Cotransporters AT5G19600 59.445 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3101 K17471 - jre:108992654 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3101 10 40543241 40554281 Sto10g3101 10 40543241 40554281 ECH