Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3100 atgaagaagaaggtcCATTCAAACCCTTTTTTAGAttcccctcttcttcttcttctcattgCCTCCTTCTTAGCCACACTCACTCTCTCCTCCGCCTCCGCCAATGTCCACATTTCCACCCATGGAGCTCTCTCCGACGCTGAAGCCATGTACATCCGGCAGCGTCAGCTTCTCTACTACAGGGACGAGTTCGGTGACAGAGGAGAACAAGTCACCGTCGACCCTTCTCTGGTCTTCGAGAATGATCGCATCAGAAATGCTTATATAGCTTTACAAGCTTGGAAGCAAGCCATTCTCTCTGATCCGCAAAATCTCACTGCCAATTGGGTTGGACCCAAAGTGTGTAACTACACTGCGGTTTACTGTGCTCCGGCCTTGGATAACCCCAAGATTAACACCGTCGCCGGCATTGATCTCAACCATGGTGACATTGCGGGGTATTTGCCGGAAGAGCTTGGGCTTCTCGTGGATCTCGCTCTCTTCCACATCAACTCCAACAGGTTTTGTGGTACTGTTCCTCACAAGTTTGATCGGCTTAAACTGCTTTTTGAACTGGATCTCAGTAACAATAGGTTCGCCGGAAAGTTTCCCGAGGTGGTCCTGAGGCTTCCCACTCTCAAGTTCTTGGATCTGAGATTCAATGAATTTGAAGGGACTGTGCCGAAGGAGCTTTTCGACAAGGATCTGGACGCGATCTTCATCAACCACAACCGTTTCGTCTTCGATATTCCAGACAATTTCGGGAACTCTCCGGTGTCGGTCATCGTCCTCGCTAACAATAGGTTCCATGGCTGCATTCCCTCGAGCTTGGGCAACATGTCGAACCTCAACGAGATCATTCTGATGAACAATGCTTTCCGTTCGTGCTTGCCTTCCGAGATTGGGTTGCTCAAGAACTTGACTGTGTTCGATGTGAGCTTCAATCAGCTTTTGGGTCCCTTGCCGGATACTATTGGGAACGTGGTGAGCCTCGAGCAGTTGAATGTGGCTCATAATTTGCTCTCTGGGAAGATTCCGGCCAGCATTTGTAATCTGCCAAATCTTCAGAACTTCACCTATTCGTATAACTTCTTCACTGGTGAGCCGCCGGCGTGTCTCAGGTTGCCGTCGTTTGATGACCGGAGAAACTGCTTGCCGGCGAGACCTGTACAGAGGTCAGCGGCGCAATGTAAGTCGTTCTTGTCTCACCCTGTGGATTGTAAATCGTTTAGTTGTAAACCTTTTGTTCCTGTGCTTCCTTCGCCTCCTTTACCTTCCCCTCCTATCCCTCGTCCTCCTTCTTCACCACCCATTGTGGTTCCTTCCCCGCCTGTTTACACTCCAcaatctcctcctcctccttcgcCACCTCCCCCTGTCTACTCACCACCACCTCCACCACCTGTTTAttcaccaccgccaccaccgcCCGTGTATTCACCACCACCTCCTccgccaccaccaccgccgcctCCTCCAGTCTAttcaccacctcctcctccaccaGTCTATTCTCCACCACCACCTCCGCCTGTCTATTCTCCTCCCCCTCCACCACCTTCACCACCCCCACCGTCACCATCTCCCCCTCCACCATCTCCGCCACCACCGTCTCCACCGCCACCTTCACCGCCACCGCCTGTGGTGTCACCACCATCACCATCGCCTCCCCCTCCATCTCCGCTACCCTCCCCAACTCCAGCTCCACCATATTGCGTCCGGTCTccaccgccgccgccaccaAATTCGCCACCACCACCGGCTCCTATGTTCTCTCCACCCCCACCTACGCCTTACTACAGCTCGCCCCCACCTCCACCGCCTCATCACTCACCTCCACCGCCTCCTCACTCACCTCCACCGCCTGTTTATCCCTATTTATCaccaccacctcctcctccGGTACATTCTCCTCCACCCCCTGTCCATTCACCACCGCCACCATCTCCACCACCTTGTATAGAACCACCTCCACCTCCCTCCCCACCACCTTGTGAAGAGCATTCACCACCACCTCCTTCCCCCACACCCTACTTACCACCCCCGTCTCCATCTCCCCCACCACCACCTGTATATGCCTCCCCATCACCCCCACCCccaccaccatcaccatcaCCCCCAGTTCATTATAGTTCCCCACCACCACCTGTTCACTACAATtccccaccaccgccaccagtTTACCATTCTCCCCCGCCGCCTTCACCGCCTCCCTGTGATACTCCACCGTCatctcctccaccaccaccaggAAGCCCACCGCCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTACGGAGTCTCGAAGGCTCTGTTTTCATTTGATTTAATAAATATGGCTTTCCATGTGCAAACCTATCTTTTGAGATTTGAATTCAAATCTTCTCCTACTTGGCGCTATCACCTTTTTCTCTCCATTGGAATTGTGAACATTGATGATACTGTTATGCTTGTGAGAAGGAGCTGGTTCTACAATCCTCGTCATAGTTCATATCACCGACTCTCTACTTTACCTCAAACACAGGCAAGAATATTAATGAATCCTTCAGTTTTTGCCTGTATCCATAGTCATGAAGTTCTAGGTTTTGCTCATTCGTATTAA 2586 0.4725 MKKKVHSNPFLDSPLLLLLIASFLATLTLSSASANVHISTHGALSDAEAMYIRQRQLLYYRDEFGDRGEQVTVDPSLVFENDRIRNAYIALQAWKQAILSDPQNLTANWVGPKVCNYTAVYCAPALDNPKINTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPEVVLRLPTLKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFVFDIPDNFGNSPVSVIVLANNRFHGCIPSSLGNMSNLNEIILMNNAFRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGNVVSLEQLNVAHNLLSGKIPASICNLPNLQNFTYSYNFFTGEPPACLRLPSFDDRRNCLPARPVQRSAAQCKSFLSHPVDCKSFSCKPFVPVLPSPPLPSPPIPRPPSSPPIVVPSPPVYTPQSPPPPSPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPPPPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPSPPPPSPSPPPPSPPPPSPPPPSPPPPVVSPPSPSPPPPSPLPSPTPAPPYCVRSPPPPPPNSPPPPAPMFSPPPPTPYYSSPPPPPPHHSPPPPPHSPPPPVYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPSPPPCEEHSPPPPSPTPYLPPPSPSPPPPPVYASPSPPPPPPSPSPPVHYSSPPPPVHYNSPPPPPVYHSPPPPSPPPCDTPPSSPPPPPGSPPPAPVYEGPLPPVYGVSKALFSFDLINMAFHVQTYLLRFEFKSSPTWRYHLFLSIGIVNIDDTVMLVRRSWFYNPRHSSYHRLSTLPQTQARILMNPSVFACIHSHEVLGFAHSY 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3100 861 MobiDBLite consensus disorder prediction 505 706 - -
Sto10g3100 861 SUPERFAMILY L domain-like 88 371 - -
Sto10g3100 861 MobiDBLite consensus disorder prediction 433 485 - -
Sto10g3100 861 MobiDBLite consensus disorder prediction 719 750 - -
Sto10g3100 861 PRINTS Proline rich extensin signature 415 427 - -
Sto10g3100 861 PRINTS Proline rich extensin signature 429 445 - -
Sto10g3100 861 PRINTS Proline rich extensin signature 449 461 - -
Sto10g3100 861 PRINTS Proline rich extensin signature 465 486 - -
Sto10g3100 861 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 480 - -
Sto10g3100 861 Gene3D Ribonuclease Inhibitor 88 249 IPR032675 -
Sto10g3100 861 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 480 - -
Sto10g3100 861 Gene3D Ribonuclease Inhibitor 250 380 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3100 Sto-Chr10 40524083 40527604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3100 1 405 Trihelix Transcription Factor Family AT4G18670 72.414 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3100 - - zju:107431856 678.707