Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3098 ATGGCAAGTCGACTGAAGGAAGATGAGAAAAATGAACGACTAATTCGAGGTCTCCTCAAACTTCCAGCAAATCGCAGATGTATTAATTGCAACAGCCTGGGACCACAATACGTGTGCACAAATTTCTGGACGTTTGTTTGCACAAACTGTAGTGGAATACACCGGGAATTTACGCATCGAGTAAAATCAGTTTCAATGGCTAAGTTTACTTCACAAGAAGTTATTGCACTTCAGGAAGGAGGAAATCAGCGTgcaaaagaaatttattttaaagaatgggatccacaaagtcaagctctccCTGATAGCAGTAATGTTGACAGGCTCCGCTATTTTATTAAGCATGTTTATGTGGACAGAAGATTCACTGGTGAGAGGACCTATGACAAAACACAGAAGGTAAAGACAAACCGGAGAGTTGAACCATATCAAGGTGGTCCTAGAAACCCGCCATATGAGGATACCTATGAACGCCGATATAATGACAGGTCTAGTCCTGGTGGAAGAAGTCCTGGGTATGATCAAGAAAGTAGGCAGTACAATGATGATAAGAGAAGTCCTGGTCGTCCTCCAATTATCAATGATTGGCGTCGTGAGGATCGTAGAATATCTGATGGAGATTATAAGCTGAAAGGCCAATCACCTGAACGAGCCAAAGATCTGGGTTCTTCAAGTCCACCTGTTGTTCGCCCTGTGAGAGAGATCTTGGGTGAAAATGTAGTACCTCTTCGAATAAGTGAACCTCCCAAAAGTAATAATGGAAAAGCTTCTGATGGTTCAGCATTGACACAGAGAACTGCATCTTCCAGTAGCTTGGCATCCAGCAATGGAAACCCTACGGAAGTTAAGTTTGAGACCGTTAAGAGCCTTATTGATTTTGATGCTGAGCCTGAACCTCCTGTGGCTCCAGCAATTCCTCAAGCTCAACAAACTACTGTAGCTCAATCCATTGCAGAGCAACCAAATTCTAATGATGGCAACAACTGGGCCTCTTTTGATGTGATCCCAGAGGCAAAAGCAACTCAAGCTCCTTCAAATGTAAATCCACTTGAATCTATGCTTTCCCAATTGTCAGTATCAGCATCTTCACCTGCTCATATTTCTCAAGCCCAAGGTGGTTCCAATGTTGTAACAACTATTCCCGGGGGTAGTGTGACAACATTACTGAAAACCGAGGACTCCTCTATATCACATACTGGGCCTGTGCCAGCATCGTCTCTTACTGCTACTGTTGGTAGCTTCTCAACTTTCCCATCTAGCGTAGTGCAGCATCAGCAACCTTTGTTCCCTCCAACTGTTAGTCAGTCTTCTACTCAACAGTTTACACCACCAGTGGTTGGAGCTTTAAATAATCAGCCATGGAATGTACCTCCTGCATCCATGATACAAGGTCATCCAAGCATGTCAATGCCACACGCCTCCCATCTTGTCTCAAAGCCTGCCAGCGAGACTAAATCTAGCATTGTTTCACAACCATCTGTCGAAGTAAAACCAGGGGGAAGAATAGAACTTCCTGAGGACCTTTTTACTGTAAATTATTCATCCTTCCCTGCTCCAGCACTGGGGTGGCAGATGAGGCCTCCTCATAGCATGGGTATTACAATGCAACATAATACTGTGGTACCCATGTCAAGTTTTCAGCAGCCATCAAAGTCAACAAATCCATTTGATGTTGGCAGTGAACCACATCCAGTTCAAGCCCCAACTTTTCCTTCAATGTCATCCGTGCACAGTGCTCTTCCCAGTGTATCACCTTCAGGCGTAATGCAACCTTCGAGCCTGGGTAACCCATCATTTGCGTGGAATCCATCCCAATCTTCACCATATGGATCAGCGCTCCCCCCACAACCACAAGCCCAACCTCATTCATCAGCAATGACACCAAGGCCTTACATGGGGCAACAAATGCCAATGAGCATACCATTACCAAGGCATCAAGAAATTGGGAGTTTTAATACTGAAGGAGGTGCTTTCGGCTACTCAAATCTTGATTGGCAGTTGACCGGTAGGTTCTCAGCCCCCGCTGCCTCAAATCTCTCTTCTGCGGGAGGGAATCCATTTGGATGA 2067 0.4412 MASRLKEDEKNERLIRGLLKLPANRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVIALQEGGNQRAKEIYFKEWDPQSQALPDSSNVDRLRYFIKHVYVDRRFTGERTYDKTQKVKTNRRVEPYQGGPRNPPYEDTYERRYNDRSSPGGRSPGYDQESRQYNDDKRSPGRPPIINDWRREDRRISDGDYKLKGQSPERAKDLGSSSPPVVRPVREILGENVVPLRISEPPKSNNGKASDGSALTQRTASSSSLASSNGNPTEVKFETVKSLIDFDAEPEPPVAPAIPQAQQTTVAQSIAEQPNSNDGNNWASFDVIPEAKATQAPSNVNPLESMLSQLSVSASSPAHISQAQGGSNVVTTIPGGSVTTLLKTEDSSISHTGPVPASSLTATVGSFSTFPSSVVQHQQPLFPPTVSQSSTQQFTPPVVGALNNQPWNVPPASMIQGHPSMSMPHASHLVSKPASETKSSIVSQPSVEVKPGGRIELPEDLFTVNYSSFPAPALGWQMRPPHSMGITMQHNTVVPMSSFQQPSKSTNPFDVGSEPHPVQAPTFPSMSSVHSALPSVSPSGVMQPSSLGNPSFAWNPSQSSPYGSALPPQPQAQPHSSAMTPRPYMGQQMPMSIPLPRHQEIGSFNTEGGAFGYSNLDWQLTGRFSAPAASNLSSAGGNPFG 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3098 688 MobiDBLite consensus disorder prediction 567 630 - -
Sto10g3098 688 CDD ArfGap_AGFG 12 122 - -
Sto10g3098 688 PANTHER ARFGAP/RECO-RELATED 1 688 IPR044820 GO:0005096
Sto10g3098 688 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Sto10g3098 688 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Sto10g3098 688 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Sto10g3098 688 MobiDBLite consensus disorder prediction 544 559 - -
Sto10g3098 688 Gene3D Arf GTPase activating protein 2 136 IPR038508 -
Sto10g3098 688 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Sto10g3098 688 MobiDBLite consensus disorder prediction 305 330 - -
Sto10g3098 688 MobiDBLite consensus disorder prediction 128 280 - -
Sto10g3098 688 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Sto10g3098 688 PANTHER ARF GTPASE ACTIVATOR 1 688 - -
Sto10g3098 688 MobiDBLite consensus disorder prediction 250 280 - -
Sto10g3098 688 MobiDBLite consensus disorder prediction 544 639 - -
Sto10g3098 688 MobiDBLite consensus disorder prediction 295 330 - -
Sto10g3098 688 MobiDBLite consensus disorder prediction 176 216 - -
Sto10g3098 688 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Sto10g3098 688 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3098 Sto-Chr10 40502346 40508667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3098 12 122 C2H2 Transcription Factor Family AT4G05330 36.207 1.53e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3098 - - gmx:100781002 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3098 10 40502346 40508667 Sto10g3098 10 40502346 40508667 ECH