Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3095 ATGGGGGCAGCTTTTCTACATGTTTTAAGACTATATCTACTTGTGAGTCTTGGTTTCATTGTTAAGTTCAATTTCCTTCTATTTCCACCAGAGACTTACTTTGCTGTTGGCTTTTACTGTTGGTGTTCAGTTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTGCAAAGCACTCCAGAGAAAAATGGTCATTCAGACGATGCTTCAAGAAGTCCTGAACTCCTCCAAGAGTTTTTGAAATCTGGTCCAAAGAAGGAACTTCTTCGAATGTGCTTTTATAAGGACAGAAAGAACATTTCATCAAAAAGGAAGATGTCAGAAACTAAGTCAACCAGTAACATAATTAAGAAACAGGACAACAAAAAAGTTTCTAGTCTCAGCAACCAGCCATCTAGGAAGCAACATAGGAAGAGCAAAAACCCTACAAGGCTCAAGCCAGCTCCTGATCAGCCTTCTGATTTTGGACATTCAAACTCCTGGGTCTGTAAAAACTCTGCTTGCAGAGCTGTTCTCTCGGTTGATGACTCATTTTGTAGAAGGTGCTCTTGCAGCATTTGTCACCTTTTTGATGGTAATAAGGATCCTAGTCTTTGGTTGGTATGCTCATCTGAATCTGCTGAAGGGGACTCCTGTGGTTCATCTTGCCATATAGAGTGTGCCCTTCAACATGAAAAAGTAGGAGTTATCGATCATGGGCAACTGATGCAACTAGATGGTGGTTATTGTTGCGTATCCTGTGGTAAAGTTACAGGGATACTGGGGGGTATTTTGGTGAATCATTACCAAGCTTTGGGCTGCAGCAACAAAATGCTTCTTGACCTATGTTGGAAGAAGCAGCTAAATATAGCAAAAGATGCTCGACGTGTAGATGTACTCTGTCATAGGTTGTATTTGAGCCACAAGCTCCTGGACGGGACTTTGAGGTATAAAGAATTGCATGAATTGGTACAAGAGGCAAAGGTTAAACTGGAAACAGAAGTAGGTCCAGTTAATGGGAATTCTGCTAAGATGGTGCGAGGCATCGTCAGCAGACTCCCTATTGCCAGTGATGTGCAGAAGCTCTGCTCTATTGCTATTGAGAAAGCTGACAGGTGGCTTGCCATTGGAAATCCAGATTCCAGAGAGGGTTCACCTTCTGCTGCCTGCAAGTTTGTTTTCGAAGAAGTAACAACTTCCTCAGTCAAAATTATTATCATTGAAGTGTCAACTGCATCTTCTGAGGACATTAAGGGATACAAGCTCTGGTACTACAAGAGTAAGGAGGAATCGATTACAAAAGATCCTGTTTGTGAGTTTCCAAAAGATCAGCGGAGGATTCTGTTATCCAACCTCCAGCCTTGCACAGAATATACTTTTCGGATTGCATCTTATGCAGATATGGGTGAGCTGGGTTATTATGAGGCCAAGTGTTTCACCAAGAATgttgaactaattaaaaaagatccTTCTTTCtcagttgatttgagtactaaaAAAGAGAAGCTTCAAAATGGAGGCAGTACTTCTGGCTCAAAAATGGAGCCCAATTCCACAGTGGAAGATTCCGGATTTAAGGTTCGAGACCTTGGGAAAGTTCTGCGTCTTGCTTGGGCTCAAGAACAAGGTCACTTTGAAGGGTTTTGCCGTGCTGATATGAAAATTTGCTGCAGAGAAACTGAAAAGGTCAAGCCTAAAAGTTTGGAGGAGGAACGTTTGCCTTCAGTTCCACGGGGACTTGATTTAAATGTTGTTTCAGTGCCTGATCTAAATGAAGAACTAGTGCCTCCTTTTGAGTCATCCAGGGATGAAGATAATGGCTGCACTTTGCAGAAAGCTATTGAGGCAGACGATGACGCCACTTCTGGTGATGCAGAGAAAATCGGTTTAGCAAAATCACACGGTAGTGGTGACTCCCAACCCTGGATGAATGGGCCAACCAGAGAAGTTCCGGCCGTAGACTCCCGTGTAGATTCATGTAGGAAAAGGGTAGCTAGCACAAACGAAGAGACACATGATTGCAATAGCACTTTGGCAAATGGCTCTCCCTTAGGCATATCTGATGGTACATGCTCCCTGGATGAGAACTATGAGTACTGTGTGAAAGTAATTCGCTGGCTAGAATGTGAGGGTCTCATCAAACAGGAATTTAGGTTGAAATTGCTAACATGGTTTAGTCTGAGGTCAACTGAGCAAGAACGAAGGGTGGTAAATACCTTCATTCAAACTCTTCTTGATGATCCAAGTAGTTTGGCAGGACAACTGGTTGACTCATTTTCTGACATTATATCCAACAAGAGGCCTAGAAATGGATTCTGCAATAAGCTGTGGCATTAG 2310 0.4208 MGAAFLHVLRLYLLVSLGFIVKFNFLLFPPETYFAVGFYCWCSVSGVQSLSSSVQSTPEKNGHSDDASRSPELLQEFLKSGPKKELLRMCFYKDRKNISSKRKMSETKSTSNIIKKQDNKKVSSLSNQPSRKQHRKSKNPTRLKPAPDQPSDFGHSNSWVCKNSACRAVLSVDDSFCRRCSCSICHLFDGNKDPSLWLVCSSESAEGDSCGSSCHIECALQHEKVGVIDHGQLMQLDGGYCCVSCGKVTGILGGILVNHYQALGCSNKMLLDLCWKKQLNIAKDARRVDVLCHRLYLSHKLLDGTLRYKELHELVQEAKVKLETEVGPVNGNSAKMVRGIVSRLPIASDVQKLCSIAIEKADRWLAIGNPDSREGSPSAACKFVFEEVTTSSVKIIIIEVSTASSEDIKGYKLWYYKSKEESITKDPVCEFPKDQRRILLSNLQPCTEYTFRIASYADMGELGYYEAKCFTKNVELIKKDPSFSVDLSTKKEKLQNGGSTSGSKMEPNSTVEDSGFKVRDLGKVLRLAWAQEQGHFEGFCRADMKICCRETEKVKPKSLEEERLPSVPRGLDLNVVSVPDLNEELVPPFESSRDEDNGCTLQKAIEADDDATSGDAEKIGLAKSHGSGDSQPWMNGPTREVPAVDSRVDSCRKRVASTNEETHDCNSTLANGSPLGISDGTCSLDENYEYCVKVIRWLECEGLIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLLDDPSSLAGQLVDSFSDIISNKRPRNGFCNKLWH 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3095 769 MobiDBLite consensus disorder prediction 488 510 - -
Sto10g3095 769 MobiDBLite consensus disorder prediction 619 647 - -
Sto10g3095 769 MobiDBLite consensus disorder prediction 104 130 - -
Sto10g3095 769 PANTHER VIN3-LIKE PROTEIN 2-RELATED 88 769 IPR044514 GO:0010048|GO:0040029
Sto10g3095 769 MobiDBLite consensus disorder prediction 488 513 - -
Sto10g3095 769 ProSiteProfiles Fibronectin type-III domain profile. 376 477 IPR003961 GO:0005515
Sto10g3095 769 SUPERFAMILY Fibronectin type III 374 460 IPR036116 GO:0005515
Sto10g3095 769 Pfam PHD - plant homeodomain finger protein 161 253 IPR032881 -
Sto10g3095 769 Gene3D Immunoglobulins 370 474 IPR013783 -
Sto10g3095 769 Pfam Fibronectin type III domain 382 461 IPR003961 GO:0005515
Sto10g3095 769 CDD FN3 377 461 IPR003961 GO:0005515
Sto10g3095 769 PANTHER VIN3-LIKE PROTEIN 1 88 769 - -
Sto10g3095 769 MobiDBLite consensus disorder prediction 101 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3095 Sto-Chr10 40469098 40472359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3095 157 762 PHD Gene Family AT3G24440 45.955 2.38e-164 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3095 - - gsj:114418583 1119.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g3095 10 40469098 40472359 Sto10g3095 10 40469098 40472359 ECH