Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3077 ATGGCTTCCGCCACCGCCAACGACGACATAGTTGCAGAAATCCCTACCTACATTCGAGTCTACAAAAACGGCACCGTCGAACGCCCCCGCCAAACCCCATTCGTCCCTCCCTCGCTTCACGACCCACAAACCGGAGTCTCCTCTAAAGACGTCGTCATCTCCGATAACCCCTCCATTTCCGCTCGTCTTTACCTTCCAAAATCCACACACCAGAAACTACCCATCTTGGTCTACTTTCATGGCGGTGGATTCTTCTTTGAATCGGCCTTCTCTCGCCTCTACCACAATTACTTCACCTCCTTTGTCTCCCGAGTAAACGTCGTTGTCGTCTCCGTGGAGTACAGGCTCGCTCCGGAGCACTATCTCCCTGCAGCATACGACGATTGTTGGGACGCTCTGAAATGGGTCGCAAGGTGTTCGACGAAAGTCCCCAATGACGAACCGTGGCTAAACCATGGTGATTTTGATAGAATCTTCATTGGGGGTGATAGTGCTGGTGGTAATATTGTGCATAACATCGCTATGCGTGCTGGGGTTGAGGATCTTCCTGGTGGGATTAGAATTTTGGGTGCTATCTATGTTCACCCTTATTTCTATAGTTCAAAGCCAATTGGGTCTGAACCTGTTTCTGGGCACGAACAGAGCTTGCCGTATTTGGTTTGGGATTTTGTGTACCCTTCTGCTCCTGGTGGAATAGACAATCCCATGGTGAATCCTCTGGCTCCTGGGGCTCCTAGTTTGGCTGGACTTGGGTGCTGTAAAATTCTGGTGTGTGTTGCAAGTAAGGATTCAATAAGGGACAGAGGGGTTTGGTTCTATGAAGGTGTCATTGCAATGGATGTTACGGAGCTGAATTCCCAGCGCAGACCATTTTCAATCAAACTATGGCCTCCTAGTCAGAACACTAGACAGATGCTTGTAGAGCGGATGAGCAACAATCTTACAGCTAAATCTATTTTCACACAAAAGTATGGAGTTTTAAATAAGGAAGAAGCTGAAGAGAATGCAAGAAGAATCGAGGACATGGCTTTTGTCACAGCTAACCTACATTATGAGAAAGAGCCAGATGGTGATGGAGGTTCTGCAGTCCAGCTTTATGCCAAAGAATGCAGTAAGCTCCTCCTAGATGTTCTTAAAAGAGGGCCTAGTAATAAGGATAACATTGAAAAAGTGACATCCAATAGTGTCACTGCATCTCGTGAATCTGTTTTTGATATATCTAAAGGAAAACGAGCCTTCATTGAAGCTGAGGAGGCTCAAGAACTTCTAAAGCCATTAAAGGAGCCTGGAAATTCTTTCACTAAAATATGCTTCAGCAACAGAAGTTTTGGAGTAGGAGCAGCCCAAGTTGCCCAACCTATTCTCACTTCCGTCAAGGACCAGTTGAAAGAAGTAGATCTATCAGATTTTATTGCTGGAAGATCGGAGGAAGAAGCTCTTGATGTCATGAATATATTCTCAGCTGCTTTGGAGGGTAGTTCCTTGAAGTATTTAAACCTCTCTGACAATGCCTTAGGTGAGAAAGGTGTTAGAGCTTTTGGAGCACTCCTGAAATCACAGACCTGCTTGGAGGAACTTTATTTGATGAATGATGGCATCTCAGAGGAAGCTGCTCAGGCAGTTTGTGAGTTGATTCCCTCGACGGAGAAGCTTAGAGTTCTTCATTTTCATAATAATATGACTGGAGATGAAGGGGCACTAGCTATAGCTGAAGTTGTGAAGCGTTCTCCTTTGTTGGAGAACTTCCGATGCTCCTCTACAAGGATAGGCTCTGAAGGTGGAGTTGCCCTATGTGATTCTCTAGGGAATTGTGCCCATCTGAAGAAGCTTGATTTACAAGACAACATGTTTGATGTCAATGGTGCTATTTCTCTGAGTAAAGCTCTTACGAAGCATGCAGAACTGAGAGAAATAAACCTGGGCTACCTTAACTTGGAAGATGAGGGTGCGATTGCTATAGTCAATGCTCTAAAGGATTCAGCTCCTCACCTTGAAATTCTGGAGATGAGTGGAAATGAAATTACAGTTGAAGCTGCTCCCGCAATAGCATCCTGTGTGGCAGCAAAACAGTTTCTTATGAAGTTGAACCTTTCTGAGAATGAACTCAAGGATGAAGGTGCCATCGAGGTAAGCAAGGCAATAGAAGGTCTTGTCCATTTAAAGGAAATTGATCTAAGCTCCAACAAAATAAGAAGGGCAGGTGCTCGTCAATTGGCTCAGACTGTGGTGCAAAAGGCTGATTTTAAGTTGCTGAACATTGATGGAAATTTCATTTCTGATGAAGGCATCGATGAGGTGAAAGATATGTTCAAGAAATTTCCTGACATGCTTGGTCCTTTGGCTGAAAATGATCCTGATGgagtagatgatgatgatgatgatgaagaaggagaACGTGATGAACAAGGAAGTGGGGATGAACTGGAACCAAAAATGAAGAATCTTGAAGTTAGCTAA 2457 0.44 MASATANDDIVAEIPTYIRVYKNGTVERPRQTPFVPPSLHDPQTGVSSKDVVISDNPSISARLYLPKSTHQKLPILVYFHGGGFFFESAFSRLYHNYFTSFVSRVNVVVVSVEYRLAPEHYLPAAYDDCWDALKWVARCSTKVPNDEPWLNHGDFDRIFIGGDSAGGNIVHNIAMRAGVEDLPGGIRILGAIYVHPYFYSSKPIGSEPVSGHEQSLPYLVWDFVYPSAPGGIDNPMVNPLAPGAPSLAGLGCCKILVCVASKDSIRDRGVWFYEGVIAMDVTELNSQRRPFSIKLWPPSQNTRQMLVERMSNNLTAKSIFTQKYGVLNKEEAEENARRIEDMAFVTANLHYEKEPDGDGGSAVQLYAKECSKLLLDVLKRGPSNKDNIEKVTSNSVTASRESVFDISKGKRAFIEAEEAQELLKPLKEPGNSFTKICFSNRSFGVGAAQVAQPILTSVKDQLKEVDLSDFIAGRSEEEALDVMNIFSAALEGSSLKYLNLSDNALGEKGVRAFGALLKSQTCLEELYLMNDGISEEAAQAVCELIPSTEKLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRIGSEGGVALCDSLGNCAHLKKLDLQDNMFDVNGAISLSKALTKHAELREINLGYLNLEDEGAIAIVNALKDSAPHLEILEMSGNEITVEAAPAIASCVAAKQFLMKLNLSENELKDEGAIEVSKAIEGLVHLKEIDLSSNKIRRAGARQLAQTVVQKADFKLLNIDGNFISDEGIDEVKDMFKKFPDMLGPLAENDPDGVDDDDDDEEGERDEQGSGDELEPKMKNLEVS 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3077 818 Gene3D Ribonuclease Inhibitor 405 690 IPR032675 -
Sto10g3077 818 Pfam Leucine Rich repeat 719 739 IPR001611 GO:0005515
Sto10g3077 818 Pfam Leucine Rich repeat 494 513 IPR001611 GO:0005515
Sto10g3077 818 Pfam Leucine Rich repeat 662 682 IPR001611 GO:0005515
Sto10g3077 818 Pfam Leucine Rich repeat 604 626 IPR001611 GO:0005515
Sto10g3077 818 Pfam Leucine Rich repeat 690 709 IPR001611 GO:0005515
Sto10g3077 818 Pfam Leucine Rich repeat 635 653 IPR001611 GO:0005515
Sto10g3077 818 Gene3D alpha/beta hydrolase 9 288 IPR029058 -
Sto10g3077 818 Pfam WPP domain 292 386 IPR025265 -
Sto10g3077 818 SUPERFAMILY alpha/beta-Hydrolases 9 279 IPR029058 -
Sto10g3077 818 PANTHER RAN GTPASE-ACTIVATING PROTEIN 1 279 817 IPR045203 GO:0005096
Sto10g3077 818 MobiDBLite consensus disorder prediction 775 818 - -
Sto10g3077 818 MobiDBLite consensus disorder prediction 784 803 - -
Sto10g3077 818 MobiDBLite consensus disorder prediction 804 818 - -
Sto10g3077 818 PANTHER RAN GTPASE-ACTIVATING PROTEIN 2 279 817 - -
Sto10g3077 818 SMART LRR_RI_2 548 575 - -
Sto10g3077 818 SMART LRR_RI_2 604 631 - -
Sto10g3077 818 SMART LRR_RI_2 689 716 - -
Sto10g3077 818 SMART LRR_RI_2 745 772 - -
Sto10g3077 818 SMART LRR_RI_2 520 547 - -
Sto10g3077 818 SMART LRR_RI_2 632 659 - -
Sto10g3077 818 SMART LRR_RI_2 492 519 - -
Sto10g3077 818 SMART LRR_RI_2 661 688 - -
Sto10g3077 818 SMART LRR_RI_2 717 744 - -
Sto10g3077 818 SMART LRR_RI_2 576 603 - -
Sto10g3077 818 Gene3D Ribonuclease Inhibitor 691 794 IPR032675 -
Sto10g3077 818 SUPERFAMILY RNI-like 413 785 - -
Sto10g3077 818 Pfam alpha/beta hydrolase fold 76 275 IPR013094 GO:0016787
Sto10g3077 818 Gene3D WPP domain 292 390 IPR038214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3077 Sto-Chr10 40318582 40324349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3077 7 273 Carbohydrate Esterase AT3G48690 44.565 1.34e-66 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3077 K14319 - gmx:100785942 837.795