Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto10g3076 | ATGACAGAAGATCATAAGATAGCAAATTATTCTGAAAGACTCCGAATTGAAAAGAGTGGTGAACCATTGAAGGATGGAGAAACACGTTTATATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAACAGCAGGATTCCCGATTTAGTTCAGAGCCTTATATAAGTCAAGTGGTGCATATTAATCAAGCAAGCAGGGCTTTCGCTGTTTTAGCCAGGTGA | 228 | 0.3904 | MTEDHKIANYSERLRIEKSGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHINQASRAFAVLAR | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto10g3076 | 75 | Pfam | Protein phosphatase 2C | 1 | 74 | IPR001932 | - | |
| Sto10g3076 | 75 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 74 | IPR015655 | GO:0004722|GO:0006470 | |
| Sto10g3076 | 75 | PANTHER | PROTEIN PHOSPHATASE 2C 70 | 1 | 74 | - | - | |
| Sto10g3076 | 75 | Gene3D | - | 1 | 74 | IPR036457 | - | |
| Sto10g3076 | 75 | SUPERFAMILY | PP2C-like | 1 | 65 | IPR036457 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto10g3076 | Sto-Chr10 | 40314154 | 40314474 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto10g3076 | 1 | 74 | PP2C-type Phosphatase Gene Family | AT5G19280 | 66.667 | 5.68e-29 | 105 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto10g3076 | K01090 | - | gmx:100170643 | 137.117 |