Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3067 ATGGTCCGATTCCAGTCCAACCGGTTGAACCGATCGGTCCAATCCAATTTTCAAAATACTGGTTGCAAGGCAATGCTCCTTTGTCGAGGGAGATCAATAGAAATTCAATTCAAAGAAATTTTGAATAGAATGGATCAAAACCAGCATGGACTACCAGCAGGAGGCATATCTGGTACTTCTGCACAAGGGCAATACAGCATGAATCAGTATCAATCTAACCAAATGATGCCTCCCTCTCAGTCTCCTGCTCAGGCATCCGCAGGAACCTACCTGAGGGAGCAGCAATTTGCTCATCAGTACATCCATCAGATGCAGCAACAGGAGCTGCAGCAACAACTCCAGAACTTTTGGGCAAATCAGTACCAAGAGATAGAGCAGACTGCTGATTTCAAGAACCACAGCCTGCCTCTGGCTAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTGAGGATGATCTCGGCCGAGGCTCCGGTGATATTCGCGAGGGCGTGCGAGATGTTCATCCTGGAGCTGACACTGAGGTCATGGATCAACGCGGAGGAGAACAAGAGGAGGACACTTCAGAAGAATGACATAGCAGCAGCAATCACAAGGACTGATGTGTTTGATTTTCTGGTTGATATTGTGCCAAGGGATGACTTGAAGGAAGAGATTTTCTCAGGGGTCCCCAGAGCTCCTCAAGCACCACCAGAGAACCTTCCTAATCCTTACTATTATATGCCACCATCACAGCAAGTTGCAAGTCCTGGCCCTGCTGCTCAATTTGGTGCTCCAAAAGTGATAATGGGGAGACCTGTGGGTGATCATCAAGCTCAAGCTCAAGCTCAAGCTCAATATGGGCAGGCAAGTCAGTCCTTCACAGCACCAATGTGGCCCCAGCAACACCAAAATCCTTCAAACAATTCAGATTGTTGA 918 0.4782 MVRFQSNRLNRSVQSNFQNTGCKAMLLCRGRSIEIQFKEILNRMDQNQHGLPAGGISGTSAQGQYSMNQYQSNQMMPPSQSPAQASAGTYLREQQFAHQYIHQMQQQELQQQLQNFWANQYQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWINAEENKRRTLQKNDIAAAITRTDVFDFLVDIVPRDDLKEEIFSGVPRAPQAPPENLPNPYYYMPPSQQVASPGPAAQFGAPKVIMGRPVGDHQAQAQAQAQYGQASQSFTAPMWPQQHQNPSNNSDC 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3067 305 Gene3D Histone, subunit A 96 212 IPR009072 GO:0046982
Sto10g3067 305 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 44 300 - -
Sto10g3067 305 SUPERFAMILY Histone-fold 99 206 IPR009072 GO:0046982
Sto10g3067 305 MobiDBLite consensus disorder prediction 268 305 - -
Sto10g3067 305 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 44 300 - -
Sto10g3067 305 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 134 197 IPR003958 -
Sto10g3067 305 MobiDBLite consensus disorder prediction 272 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3067 Sto-Chr10 40239368 40242548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3067 44 268 CCAAT-HAP5 Transcription Factor Family AT1G08970 55.752 2.56e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sto10g3067 CBFD_NFYB_HMF 6.3e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3067 K08066 - zju:107423263 278.87