Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3063 ATGCTTGATACTGGTAACTTTGTACTGGCTAGCAATGATTCTCTAACTTTGTGGGAGAGCTTTGATCATCCCGCCGACACAATTTTACCAGGACAAGTTCTGAATCAACCTTCTAGGCTCGTTTCGCGCTATTTGGCAACTAATTATTCGAGGGGAAGATTCCAATTTGTACTACAAAATGATGGGAACCTAGTGCTTTACACAACCCTTTTTCCTTTGGATATTGTTAATTTTCCTTATTGGTCTACCCAGGTTTTTGGCAATGGCTTCTCATTGGTTTTCAACCAGTCAGCCTATATATTTGCTCAGAGAAGTGATGGAAGTATAATTGAAACAATATCATCAAATGCTCCCTCCACACAAGATTTCTACCATAGAGCTATTCTTGATTATGATGGAGTTTTCAGGCATTATTACTACCCCAAGAGTAGTAATTCTAGCAGTAGAAGCATTCTCATGGCTTGGTCAACTTGGTCCTtcacaccatcaaatatttgtaTGAGAATTGAAGCAGCTGTAGGAAGTGGAGCTTGTGGATTTAATAGCTACTGTATGTTTAATAATGGAACCAAAAGCTGTCATTGTCCAATAGGTTACAGCTTCTTTGATCCAAATGATACAATGAAAGGATGCAAACAAGACTTTGTCCCACAAAGTTGTGATGATACTTATTCAGAAACACATCTCTTTGATTTCCATGAGATGCCAAACACGGATTGGCCTTATACTGACTACGAATACTTTAAATCAACAAGTGAGGAATGGTGCAAACAAGCTTGCTTGGATGATTGTTTTTGTGCTGTTGTTTTTTTCAGAAATGGGGAGTGCTGGAAGAAGAAGAGACCTTTCGCTTTTGGAAGAATGGATTCTTTTATTGGAGGGAAAGCTCtaatcaaaataagaaaagataacTCTACTTTGAATTCTGGGGTTACTGATAAGAACAATGATCAGTACTCAAAGTTGATTATCACTGGATCAACAATTTTAAGTAGTTCTGTGTTCTTGAACTTGGTCTTGTTAGTGGCAGCTTGTCTAGTTGCAAACTGGTTTGTCCGCAAGAATCCTATGGTGCTTCCAGTTGTTCAATACTCACCAGGCATGAACCTTAGAAGTTTCTCTTATAAAGAGTTAAGCAAAGCAACAAATGGGTTCACAGAAGAACTAGGTCATGGTGCATGTGCTACAGTGTACAAAGGTGTTCTGTTAGACTTTCCAGGAAACCTCATTGCTGTGAAGAAACTGAATACGGTGAAAGAAAGCGAGGAGGAGTTCGAAGCAGAAGTAAGCGCAATCGGCCGGACACATCACAGAAATTTGGTACAACTCCTAGGATTCTGCAATGAAGGTGAGCACAGGCTACTTGTGTACGAATTCATGAGCAATGGAAGTCTAGCAAGTTTTTTATTTGACAAGAAAAGGCCAAGCTGGAATCAAAGAGTGCAAATTGCTATAGGAACAGCCAGAGGATTGATGTACTTGCATGAAGAGTGCAGCACTCAGATCATTCACTGTGATATCAAGCCTCAAAATGTGTTGCTTGATGACACTTACACAGCAAAAATCTCAGATTTTGGTTTAGCAAAGCTACTGAAGTTGGATCAGACTGTGACTACTACAGCCATAAGGGGAACTAAAGGGTATGTTGCAGCTGAGTGGTTCAAAAACATTCCCATTAACATTAAGGTTGATGTATACAGCTATGGAGTTCTGTTACTAGAGCTTATCTGCTGCAAAAGGAACTTTGAcatgaaggttgaagatgagaATGAGATGGTATTAGTAGATTGGGCAAGTGATTGCTTTCAAGATGGGAAACTTTATTCATTGgtggaagatgatgaagaagcaTTGGATGACCTGGAGAGGGTGGAGAAGTATGTGATGATTGTTATGTGGTGCATTCAGGAGGATCCATTACTTAGACCCACCATGGAGCAGGTCTTACATATGCTTCAAGGATTCATGGATGTACCAAATCCTCCTGATCCATCCTCCTTTACAAGTGCactataa 2016 0.3834 MLDTGNFVLASNDSLTLWESFDHPADTILPGQVLNQPSRLVSRYLATNYSRGRFQFVLQNDGNLVLYTTLFPLDIVNFPYWSTQVFGNGFSLVFNQSAYIFAQRSDGSIIETISSNAPSTQDFYHRAILDYDGVFRHYYYPKSSNSSSRSILMAWSTWSFTPSNICMRIEAAVGSGACGFNSYCMFNNGTKSCHCPIGYSFFDPNDTMKGCKQDFVPQSCDDTYSETHLFDFHEMPNTDWPYTDYEYFKSTSEEWCKQACLDDCFCAVVFFRNGECWKKKRPFAFGRMDSFIGGKALIKIRKDNSTLNSGVTDKNNDQYSKLIITGSTILSSSVFLNLVLLVAACLVANWFVRKNPMVLPVVQYSPGMNLRSFSYKELSKATNGFTEELGHGACATVYKGVLLDFPGNLIAVKKLNTVKESEEEFEAEVSAIGRTHHRNLVQLLGFCNEGEHRLLVYEFMSNGSLASFLFDKKRPSWNQRVQIAIGTARGLMYLHEECSTQIIHCDIKPQNVLLDDTYTAKISDFGLAKLLKLDQTVTTTAIRGTKGYVAAEWFKNIPINIKVDVYSYGVLLLELICCKRNFDMKVEDENEMVLVDWASDCFQDGKLYSLVEDDEEALDDLERVEKYVMIVMWCIQEDPLLRPTMEQVLHMLQGFMDVPNPPDPSSFTSAL 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3063 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Sto10g3063 671 SUPERFAMILY Protein kinase-like (PK-like) 364 653 IPR011009 -
Sto10g3063 671 Pfam Protein kinase domain 387 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3063 671 ProSiteProfiles Protein kinase domain profile. 383 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3063 671 SMART serkin_6 383 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g3063 671 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 1 668 - -
Sto10g3063 671 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 84 IPR036426 -
Sto10g3063 671 Gene3D Transferase(Phosphotransferase) domain 1 460 664 - -
Sto10g3063 671 Gene3D Phosphorylase Kinase; domain 1 356 459 - -
Sto10g3063 671 CDD PAN_AP_plant 216 300 - -
Sto10g3063 671 Pfam D-mannose binding lectin 1 35 IPR001480 -
Sto10g3063 671 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 668 - -
Sto10g3063 671 Gene3D - 24 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3063 Sto-Chr10 40199532 40205357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3063 350 654 Receptor kinase-like Gene Family AT1G60800 41.509 3.74e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto10g3063 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3063 - - adu:107482645 847.425