Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3059 atgTCTCACATAGCAGTAGAGAGGAACAGGAGGAGACAGATGAATGAGTATCTCAAGGGAGACCAAGCATCTATAATAGGGGGTGTAATAGAGTTTATCAAGGAGTTAGAGCAAGTTTTGGAAGCTTTGGAgtggaagaaaagaaggaagagtTTAAGCCCTAGCTATAGCCCAAGAACTGCATGCTCAAAAAACTTTGAAGTTGATCATCATCATAGTCCTCCCTTGAAGGAAGCAGAAGCAGGAGGAGCAAGCTGCAATTCTGAAGTTGCAGATGTGGAAGTGAAAATCTCAGGCCCAAACGTGATTTTGAGAGTAATTACTCACAAAATTCCTGGTCAAGTTTCAAACATAATCACCATTTTGGAAACACTTTCTTTTCAAGTCCTTCATCTCAACATTAGCAGCATGCAGGATACCGTTCTATACCACTTTGTGCTTAAGATAGGACTGGAGTGCCAACTAAGTCTGGAGGAACTAGCAATGGGAGTACAACAAAGCTTCTGCTCAGATGCTGATCTTGCTCTTAATTAA 534 0.3951 MSHIAVERNRRRQMNEYLKGDQASIIGGVIEFIKELEQVLEALEWKKRRKSLSPSYSPRTACSKNFEVDHHHSPPLKEAEAGGASCNSEVADVEVKISGPNVILRVITHKIPGQVSNIITILETLSFQVLHLNISSMQDTVLYHFVLKIGLECQLSLEELAMGVQQSFCSDADLALN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3059 177 Coils Coil 33 53 - -
Sto10g3059 177 PANTHER TRANSCRIPTION FACTOR MUTE 1 172 - -
Sto10g3059 177 PANTHER TRANSCRIPTION FACTOR FAMA 1 172 IPR044283 GO:0003700|GO:0010052
Sto10g3059 177 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 57 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3059 Sto-Chr10 40167832 40169138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3059 1 171 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 56.061 4.64e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3059 - - gmx:100810771 224.942