Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3040 ATGGTGAGAGTTAGTGTCTTAAATGATGCTCTCAAGAGTATGTACAATGCTGAGAAACGGGGGAAACGTCAGGTCATGATTAGGCCATCTTCAAAAGTGATTATTAAATTCCTTTTGGTGATGCAGAAGCATGGATACATCGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGCAAAATTGTGGTTGAATTGAATGGAAGACTGAATAAATGTGGAGTTATTAGTCCTCGTTTTGATGTGGGTGTCAAAGAGATAGAACCTTGGACTGCTAGGCTGCTTCCTTCAAGACAGTTTGGTTATATCGTCTTGACTACCTCTGCTGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGCTGGGAGCAGGCCATGTCCAAAAGCTAGCTGGACTCGACGCCTACGTCTCTGGCTCCTCCGATTCCAACCTTGCCGTCATTCTGGCCTCCGATATCATGgGTTATGAAGCGCCAATTTTGAGAAAAATTGCAGACAAGCTTGCTAATGCAGGGTATTATGCTGTTGTTCCTGATTTCTTCTATGGTGATCCCTGGGATCCTGATAATCCTGACAGGCCTGTATCTATTTGGGAAAAAGATCATGAACCGGATAAAGGTGCTGAAGATGCAAAACGTATAATTGAAGCCTTAAAAGGTAAAGGTGTTTCATCAGTTGGGGCTGCTGGTTTCTGTTGGGGTGGCAAGGTTGGTGTGGATCTTGCAAAACCTGGACTTACTAAAGCTGTTGTGTTATTACACCCAGCAGATGTCACTGTGGATGACATCAaggGTGTTGAAGTTCCAATTGCTATACTTGGAGGAGAATTGGATACTGTTTGTCCTGCCGAACGTGTTAAACATTATGAACAAGCCCTAGCAGCTAAACCTGAGGTTGATAGTTTTGTTAAATTATTTCCTGGAGTTGCACACGGTTGGACTGTGAGGTACGACGAGGATGATCCAGTAGCTGTGAAGGCTGCAGAGGAGGCTCATCAGGACATGTTGACCTGGTTTGATAAGTATCTCAAATGA 1047 0.4374 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGAGHVQKLAGLDAYVSGSSDSNLAVILASDIMGYEAPILRKIADKLANAGYYAVVPDFFYGDPWDPDNPDRPVSIWEKDHEPDKGAEDAKRIIEALKGKGVSSVGAAGFCWGGKVGVDLAKPGLTKAVVLLHPADVTVDDIKGVEVPIAILGGELDTVCPAERVKHYEQALAAKPEVDSFVKLFPGVAHGWTVRYDEDDPVAVKAAEEAHQDMLTWFDKYLK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3040 348 Gene3D alpha/beta hydrolase 133 346 IPR029058 -
Sto10g3040 348 PANTHER ENDO-1,3-1,4-BETA-D-GLUCANASE-LIKE PROTEIN 126 348 - -
Sto10g3040 348 SUPERFAMILY alpha/beta-Hydrolases 140 348 IPR029058 -
Sto10g3040 348 Gene3D - 1 69 - -
Sto10g3040 348 Gene3D - 70 128 - -
Sto10g3040 348 Pfam Dienelactone hydrolase family 137 346 IPR002925 GO:0016787
Sto10g3040 348 SUPERFAMILY Ribosomal protein S8 4 127 IPR035987 GO:0003735|GO:0005840|GO:0006412
Sto10g3040 348 Pfam Ribosomal protein S8 7 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sto10g3040 348 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sto10g3040 348 PANTHER DIENELACTONE HYDROLASE 126 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3040 Sto-Chr10 40003067 40013191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3040 1 127 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.850 1.33e-86 255