Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3035 ATGGTGAGAGTTAGTGTCTTAAATGATGCTCTCAAGAGTATGTACAATGCTGAGAAACGGGGGAAACGTCAGGTCATGATTAGGCCATCTTCAAAAGTGATTATTAAATTCCTTTTGGTGATGCAGAAGCATGGATACATCGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGCAAAATTGTGGTTGAATTGAATGGAAGACTGAATAAATGTGGAGTTATTAGTCCTCGTTTTGATGTGGGTGTCAAAGAGATAGAACCTTGGACTGCTAGGCTGCTTCCTTCAAGACAGTTTGGTTATATCGTCTTGACTACCTCTGCTGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGgatatgACCTTAAAGTCACCACTCACTGCTTAACAACAGCTCAAAAATTGCTGGAAATGGTCCCTCTAAAGTCTAAAGTCTTATCTCCTTAG 459 0.4052 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGYDLKVTTHCLTTAQKLLEMVPLKSKVLSP 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3035 152 SUPERFAMILY Ribosomal protein S8 4 124 IPR035987 GO:0003735|GO:0005840|GO:0006412
Sto10g3035 152 Pfam Ribosomal protein S8 7 124 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sto10g3035 152 PANTHER 40S RIBOSOMAL PROTEIN S15A-1-RELATED 1 124 - -
Sto10g3035 152 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 124 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sto10g3035 152 Gene3D - 70 128 - -
Sto10g3035 152 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sto10g3035 152 Gene3D - 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3035 Sto-Chr10 39976078 39977646 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3035 1 123 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.748 2.75e-87 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3035 K02957 - mus:103999910 247.284