Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3012 ATGGCTCGTTGCAATGGAAAAGATTCAAAAGAAGGTATGGACGGAGAAGTTCTAGAAGCCGCCAAGACTCTCATGTTAATGAAGTACCGAAAGATAAGCCTAGACGAAGAAGAAATGCTGCAAAAGAAAATCGCAAAAGACAGATCACCAAAGCCCAATCATCATGATAAATGCGATGAAGATAATGTGTCATCACTTCTTCCAAAAGAAATTTCCATGGTTCCTTGTCTGAGAGGGATGGTGAAAGAGTTTTCTAGTGTCGCAGTGGAGAAGCAATTGACGAGGAGCGATGTGAAAGCCGATCAAAATCGACTCAATCTGACCAAAAAAGTGGTGGAAGATTCGTTCTTGCCTATGCTCAAGGATGATGAGATTGTGACACGTGGTATTCCCGTGACGGGATATGACAAATATGGTAATGCATATTCCTTCAACTTTATCTTATGGGCAAACAAGCTTTATGTGCTGAATGGAGAATGGCAGAATTTCGTGTGCTTCCATGGATTGCGAGAGGCAGAAGCGACTTTGACAATTTCTTTACGTGTCCTTGGACCTGTCTCACACACCACAAGCTTCCTTAGCTTCTTCTGCACTCTCAATCCACACTTCACTATTATTATATTACTCCCATCAAATGCTCCATTGCTCCTCCTCTTCCAACCATCTAATTAA 672 0.4196 MARCNGKDSKEGMDGEVLEAAKTLMLMKYRKISLDEEEMLQKKIAKDRSPKPNHHDKCDEDNVSSLLPKEISMVPCLRGMVKEFSSVAVEKQLTRSDVKADQNRLNLTKKVVEDSFLPMLKDDEIVTRGIPVTGYDKYGNAYSFNFILWANKLYVLNGEWQNFVCFHGLREAEATLTISLRVLGPVSHTTSFLSFFCTLNPHFTIIILLPSNAPLLLLFQPSN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3012 223 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 46 178 IPR005508 GO:0003677
Sto10g3012 223 CDD B3_DNA 91 171 IPR003340 GO:0003677
Sto10g3012 223 SUPERFAMILY DNA-binding pseudobarrel domain 90 171 IPR015300 -
Sto10g3012 223 Gene3D - 82 181 IPR015300 -
Sto10g3012 223 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 46 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3012 Sto-Chr10 39811369 39816066 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3012 86 169 B3 DNA Binding Superfamily AT1G20600 37.647 2.03e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3012 - K19625 mdm:114822995 94.7449