Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g3000 ATGGGTTGTGTCCATTGCAAGTGTTGTCGCGGGTACCTTCCGCCGTCGGAGTGCGGTGGTTCCGGCGACTACAGAGGATTCGGCCCCCACCGTGGCCAAAGGAAACACAAGCTTACTCAAAGTTCATTGAAGTTTGCTCCCGTCCCTTCGCATAATTTCGTTTTGGAATACTCGTTTCTCACGCAACAAGGCTACTACCCTGACTCACCTGATAAAGAAAACCAAGATAGTTTCTGTATTAGGACACAAGTTCAAGGTAACCCTAGTATCCATTTTTTTGGTGTCTATGATGGGCATGGTCAATGTGGTAGTCAATGTTCGAATTTTGTCAAGGAAAGGTTGATAGAAACATTATCAAATGATTCATCATTGATGGAGGACCCTGTTAAAGCTTATAATTCAGCTTTCTTGGCAACAAATTACCAATTACATAACAGTGAGATTGATGATTCTATGAGTGGCACTACTGCCATAACGGTGCTTGTTATTGGGGACACCCTTTATGTTGCTAATGTTGGTGATTCAAGAGCAGTGCTAGCTGTTAAGGATGGGAATGGTGTTGTTGCTCAGGACTTATCTTCTGATCAGACTCCATTTCGGAGAGATGAATATGAGAGAGTGAAACTTTGTGGTGCGAGGGTGCTGAGTGTTGATCAGGTGGAAGGGCTTAAGGATCCGGATGTTCAGACTTGGGGTGATGAAGAGACTCAGGGTAGCGATCCTCCGAGGTTGTGGGTTCCAAATGGGATGTATCCTGGAACTGCATTCACAAGGAGTTTAGGGGATAGTTTGGCAGAGACTATAGGTGTCATTGCTACTCCAGAGGTCTCAACTGTTCAGCTTACACCTAATCATCTTTTCTTTATTGTGGCAAGTGATGGTGTATTTGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCAGCAAGCTATACAGATCCCGGTGATGCATGTGCTGCGATTGCTGGAGAGGCATATAAACTATGGTTGGAAAATGAGAACCGAACAGATGATATAACAATTATTATTGTTCAGATCAAAGGCAGGTGCATCTGGAGTTGGATCAGATAA 1071 0.4398 MGCVHCKCCRGYLPPSECGGSGDYRGFGPHRGQRKHKLTQSSLKFAPVPSHNFVLEYSFLTQQGYYPDSPDKENQDSFCIRTQVQGNPSIHFFGVYDGHGQCGSQCSNFVKERLIETLSNDSSLMEDPVKAYNSAFLATNYQLHNSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNGVVAQDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDVQTWGDEETQGSDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVIATPEVSTVQLTPNHLFFIVASDGVFEFLSSQTVVDMAASYTDPGDACAAIAGEAYKLWLENENRTDDITIIIVQIKGRCIWSWIR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g3000 356 CDD PP2Cc 72 346 IPR001932 -
Sto10g3000 356 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 28 348 - -
Sto10g3000 356 SUPERFAMILY PP2C-like 48 347 IPR036457 -
Sto10g3000 356 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Sto10g3000 356 ProSiteProfiles PPM-type phosphatase domain profile. 56 346 IPR001932 -
Sto10g3000 356 Pfam Protein phosphatase 2C 79 322 IPR001932 -
Sto10g3000 356 SMART PP2C_4 48 344 IPR001932 -
Sto10g3000 356 Gene3D - 48 348 IPR036457 -
Sto10g3000 356 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 28 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g3000 Sto-Chr10 39744121 39747242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g3000 1 347 PP2C-type Phosphatase Gene Family AT3G06270 69.253 2.15e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g3000 - - aprc:113872580 602.823