Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2995 ATGCATACCATATTAGACTTGAGAGGTTTAGACTCTGTGGAGCAACACATTCCATCTGATCAATGTTGTACAAGAGGAGGACGTGAACTTGAGGAATGCTCAAGCAGTACAGAACCCAGATCACCTTCTTCCAGGGCTAGCACTTCTGATTCAGAGACTCAATCAAACAATAATCAATGGCATACTTTCTTTCGTTTGTTGAAGAAGGGGCCTCGAATGCGATTTCAACCATTTTATCCACTTAAAAGTGTTCCAAAACTCACCAGAAGAAAAAGCAAGAGATTCAGAGAAGATCAGATCCCAATTATTGGCTCTTCATCCCCTTTGAAAGCAGCTATTGATGCTGACTTGTATTGCTTCAAAGCTTCTTGGATCAATTTCTCTTTTGCTGATATTCTATCTGCAACTAATAGCTTTAGCCAAGAGAATTTGATTGGACAGGGAGGTTATGCTGAGGTTTACAAAGGCAAAATGGAAGATGGGAAATTTGTTGCTATTAAAAGGCTAACAAGAGGAACCCAAGAAGAAATGACTGCAGATTTCTTGTCAGAGCTTGGAATTATAGTGCATGTGGACCATCCCAATATTGCCAGATTAATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAGTTATCTCCACATGGCAGCCTTGCATCCATACTTTATGGACCAAGAGAGAAACTAGATTGGAGCATCCGATTCAAGGTTGCCGTTGGGTCGGCCGATGGCCTTCGGTATCTGCATGAGGAATGTCCAAGAAGGATTATTCATAGAGATATCAAAGCTGCTAATATTTTGCTGTCAGAGGATTTTGAAGCTATGATATCTGATTTTGGGCTGTCAAAGTGGTTACCTGACCAATGGACTCATCACACTATTTCGAAAATCGAAGGCACATTCGGGTACCTTCCTCCAGAATTCTTCATGTATGGTTTAGTAGATGAAAAGACTGATGTCTATGCCTATGGAGCAAAACCTTTGCTATCTACAAATAACATCAAGGAGCTTGTTGATCCATGTCTGCATAATGCTTATGATGAAGAACAAATGAATCTTATAGCTTTTGTAGCTTCATTGTGCATAGATCAAGCTGCAGTTCAACGACCACATATGAGCCAAGTATTAAAGATTCTAAAAGGTGAAGAAGATTGCTTGGGACGGATGAAAATGCGACAAAAGTCCAAAATTCAAAGGACTTACTCTGAAGAACTATTGGATGCAGAAGAATACAACTCCACCAAGTTCTTGAATGAAGTGGATCGACATATGGAGACTCTTCTAGGAAATTGCAACTCCAGTGAAGAATAA 1317 0.3994 MHTILDLRGLDSVEQHIPSDQCCTRGGRELEECSSSTEPRSPSSRASTSDSETQSNNNQWHTFFRLLKKGPRMRFQPFYPLKSVPKLTRRKSKRFREDQIPIIGSSSPLKAAIDADLYCFKASWINFSFADILSATNSFSQENLIGQGGYAEVYKGKMEDGKFVAIKRLTRGTQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLASILYGPREKLDWSIRFKVAVGSADGLRYLHEECPRRIIHRDIKAANILLSEDFEAMISDFGLSKWLPDQWTHHTISKIEGTFGYLPPEFFMYGLVDEKTDVYAYGAKPLLSTNNIKELVDPCLHNAYDEEQMNLIAFVASLCIDQAAVQRPHMSQVLKILKGEEDCLGRMKMRQKSKIQRTYSEELLDAEEYNSTKFLNEVDRHMETLLGNCNSSEE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2995 438 ProSitePatterns Protein kinases ATP-binding region signature. 145 167 IPR017441 GO:0005524
Sto10g2995 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Sto10g2995 438 PANTHER OS08G0249100 PROTEIN 36 419 - -
Sto10g2995 438 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 36 419 - -
Sto10g2995 438 ProSiteProfiles Protein kinase domain profile. 139 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2995 438 Gene3D Transferase(Phosphotransferase) domain 1 216 407 - -
Sto10g2995 438 Pfam Protein tyrosine and serine/threonine kinase 142 326 IPR001245 GO:0004672|GO:0006468
Sto10g2995 438 MobiDBLite consensus disorder prediction 36 56 - -
Sto10g2995 438 SUPERFAMILY Protein kinase-like (PK-like) 127 404 IPR011009 -
Sto10g2995 438 Gene3D Phosphorylase Kinase; domain 1 105 213 - -
Sto10g2995 438 SMART serkin_6 139 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2995 438 MobiDBLite consensus disorder prediction 21 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2995 Sto-Chr10 39703672 39707103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2995 110 385 Receptor kinase-like Gene Family AT1G53420 38.111 2.43e-61 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto10g2995 PK_Tyr_Ser-Thr 2.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2995 - - lja:Lj6g3v1915960.1 606.29