Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2973 ATGCCTGCCTCCAGAAAGCGCTCGCTAGAAAGGACCGGAAGCCTCCAGATCGAGCGCGATCGGAGGTCCAAGATGAGCCACATGTTCGCCGAGCTTCAATCCACCGTCCCTGGTCTCTTCTCCAAGgttacGAGGGAAGTGATTGTGAATGAGACGATAAACTACATCAAGCACCTCGAGAACAAGAAGAGAAGATTGGAAGAGCTTAAGGCTTGTTCGACGACGACGACGGCGGCGATGATTGAACCTACTGCACGTACAACAACAACAAGCAATAATAAGAGGAACAATTCCTCCATTACAGTCACGCTTTCTGCTTCCAATGTGGCCTTCTTTGGGATTCAATCGAAGGCTCAACCTGGTTTACTCACACGCATCTTCAAGGTCTTCTTCAATCACAATGCTGAAATTTTGGCTGCTAATGTTTCTGTCAACAATGGGGATTTGACATTGGCAATCACAGCGCTATTACCTCATAACAATCACAATGGCGGTGATGGAAATGGAACTGCTGAGAAGATTAAGACAGAGATTCTGAGTTTGTAG 546 0.4652 MPASRKRSLERTGSLQIERDRRSKMSHMFAELQSTVPGLFSKVTREVIVNETINYIKHLENKKRRLEELKACSTTTTAAMIEPTARTTTTSNNKRNNSSITVTLSASNVAFFGIQSKAQPGLLTRIFKVFFNHNAEILAANVSVNNGDLTLAITALLPHNNHNGGDGNGTAEKIKTEILSL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2973 181 Gene3D - 3 73 IPR036638 GO:0046983
Sto10g2973 181 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 163 - -
Sto10g2973 181 CDD bHLH_AtbHLH_like 18 67 IPR045239 -
Sto10g2973 181 Pfam Helix-loop-helix DNA-binding domain 16 60 IPR011598 GO:0046983
Sto10g2973 181 ProSiteProfiles ACT domain profile. 111 181 IPR002912 -
Sto10g2973 181 SMART finulus 15 65 IPR011598 GO:0046983
Sto10g2973 181 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 72 IPR036638 GO:0046983
Sto10g2973 181 Coils Coil 49 76 - -
Sto10g2973 181 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 59 IPR011598 GO:0046983
Sto10g2973 181 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 8 163 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2973 15 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 26.761 1.30e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto10g2973 HLH 5.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2973 - - aprc:113874666 172.555