Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2971 ATGGGTGGGTGTTTTCCTTGCTTTGGATCATCCAGCAAGGAGGACAAAGGGTTAAAGGAAGTAGTTGTCAAGAAAGATTCCTTCAAAGAAGCTTCAATTGCTCAGTCTTACCACACCAATAGGCTTGGCTCAGATAAATCAAAATCGCGAAGTGGCTCTGATCCAAAGAAGGAACCACCGGTACCAAAGGAACCAACAGCCCACATTGCTGCACAAACATTTACATTCCGAGAGCTTGCTTCTGCTACAAAGAATTTTAGGCCAGAATGTTTAATAGGTGAAGGAGGTTTTGGACGTGTTTACAAAGGTCGCCTTGAGAGCACAGGACAAGTAGTTGCTGTAAAACAGCTTGATCGCAATGGCCTTCAAGGAAATCGAGAATTTTTGGTGGAAGTTCTCATGCTCAGCCTCTTGCATCACCAAAATCTTGTTAACTTAATTGGTTATTGTGCTGATGGTGACCAGCGGCTTCTTGTTTATGAATTTATGCCATTGGGCTCTTTGGAGGATCATTTACATGATCTTCCTCCTGAGAAGGAGCCCCTGGACTGGAACACTAGGATGAAAATAGCTGCTGGCGCCGCAAAGGGATTGGAATATTTGCATGACAAAGCAAACCCCCCAGTAATTTATAGAGACTTGAAGTCATCCAACATCCTTCTAGATGAGGGATTTCATCCCAAGTTATCAGATTTTGGGCTTGCGAAACTCGGTCCTGTTGGCGATAAGACTCATGTATCTACACGAGTAATGGGAACCTATGGTTATTGTGCTCCAGAATATGCTATGACAGGCCAACTAACTCTTAAGTCTGATGTATACAGTTTTGGAGTTGTCTTCCTTGAACTTATTACCGGGCGCAAGGCCATTGATAATACACGAGGACATGGAGAGCATAATCTGGTTGCCTGGGCACGACCTCTTTTCAAAGACCGAAGGAAATTCCCGAAAATGGCTGATCCGCTACTTCAAGGCCGTTACCCTATGCGAGGACTCTATCAAGCACTTGCAGTTGCTGCCATGTGTTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGGGATGTTGTGACAGCTCTCACATACCTTGCCTCGCAGACATATGACCCGAATGCAGCCAATCAGACCAACAGAGTCGGTTCATCAACACCAAGGAACAGTGATCGGAGGAGCATGATAGATGGCGTTATGGATAGCCCTGATCAAGGACGTAGTGGCTCGCCTTCCACTCATAAGAACTCACCAGATGTCAGGAGGGCGAGAGAGGGTACAGACTTGGGCAGAATTGAAACTGGGTCAGGGAGAAAATGGAGATTGGATGACACTGAAGACAGCCCTGTAAATACTGGAAGAGCTAGGGAAACTCCGAGGAACCGTGACCTAGACAGAGAACGAGCAGTTGCAGAAGCAAAAGTATGGGGAGAGaattggagagagaaaaagCGGGCGAATGCTGCAGGTAGCTTTGATGCTTCGAATGAGTAA 1485 0.4572 MGGCFPCFGSSSKEDKGLKEVVVKKDSFKEASIAQSYHTNRLGSDKSKSRSGSDPKKEPPVPKEPTAHIAAQTFTFRELASATKNFRPECLIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPEKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAANQTNRVGSSTPRNSDRRSMIDGVMDSPDQGRSGSPSTHKNSPDVRRAREGTDLGRIETGSGRKWRLDDTEDSPVNTGRARETPRNRDLDRERAVAEAKVWGENWREKKRANAAGSFDASNE 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2971 494 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2971 494 MobiDBLite consensus disorder prediction 34 67 - -
Sto10g2971 494 CDD STKc_IRAK 92 361 - -
Sto10g2971 494 Gene3D Transferase(Phosphotransferase) domain 1 163 384 - -
Sto10g2971 494 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 488 - -
Sto10g2971 494 MobiDBLite consensus disorder prediction 371 466 - -
Sto10g2971 494 PANTHER OS07G0668900 PROTEIN 1 488 - -
Sto10g2971 494 MobiDBLite consensus disorder prediction 371 389 - -
Sto10g2971 494 Pfam Protein kinase domain 91 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2971 494 MobiDBLite consensus disorder prediction 414 466 - -
Sto10g2971 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Sto10g2971 494 MobiDBLite consensus disorder prediction 43 63 - -
Sto10g2971 494 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2971 494 Gene3D Phosphorylase Kinase; domain 1 60 162 - -
Sto10g2971 494 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Sto10g2971 494 SUPERFAMILY Protein kinase-like (PK-like) 62 360 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2971 Sto-Chr10 39500238 39503855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2971 4 365 Glycoside Hydrolase AT3G07070 66.396 1.68e-172 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Sto10g2971 Pkinase 9.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2971 - - gmx:100814575 848.966