Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2963 ATGTATGCTTGTTATCGCAAATCCCTTTTCTTCCTTAAGGCTTTTACGCCAACCTCCTCAATTTCACTGCTACCACTTTTTCCTAAACCTAGCCCATCCCCATTGGGGCACAGTTACAGAACAGCCGAAAGCGCCTCGGAGAAGCTCTGTTTCAGGACGAACTACCTCATCAACACTTGTGGCTTCTCCCCAGAAAACGCTTCACAACTTTCCAGGATTGTCACTTTTGTTAAATCAGACGCTCCTGATGCTTTCCTCGACCTCTTAAAATCCCTTGATCTTTCGGACTCTGTGATACGTGATACCATTAAGAGGGCACCTCGGATTCTTTCATGCGATCATGCTAGGACCATTACGCCCAAGATTGAGTTTTTTAAGTCTAAAGGCGCTTCAAGCTCTCAACTTGCCCGGATAGTGACCTTTAACCCCTCGTTCCTTCTCAACAGCTTAGAGAATCAGATAATCCCTAATTATGATTTGCTGAGAAGCTTATTTCATTCTGATAAAAAGACCGTAACGTCTATACAACGCTGTCCCAGAATTGTCACTGATTCTTATCTGGCTCAAAAAGTCAAGCTTTTGCAAGATTGCGGTGTGTCTGAATCACACATAGCTCGGCTAATTGGTCATTGGCCTCGAGTACTCTGCTGCGGTATAGATTTGTTGAAAAGGAAAGCTGACGAGTTATTGGAAATGGGATTTCATCCTTCAAAATCAACTTTTATAGAGGCATTGTTTGCCAAAGTAATCATAAGCAAATCCTCGTGGGAAAGTAAGGTTGAATTGTATAGGAGGTGGGGTTGGTCTGAAGAAACACTTGTTGAAGCATTTATAAGGGGACCTGCCTGTATTGTGTCATCTTGCCATAAAATTGATGCAGTGATGGATTTTCTTGTCACCCGCATGGGTTGGGACTCTCTTTATCTTGCTAAAAACCCAGCACTTCTCTATTATTCTTTAGAGAAAAGAGTGGTTCCTAGGGCGTTTGTCTTGCAGTTTCTTCAATCTAGAGGCGCGGTGCACCATCTCCCTCCTTCGTATCTTTCTTCTGATCTGAGACTTCTTGAAACAATGTATGATTGTTATCACAAATCATTGCTCTACCTGAAGAGTTTTATGAGAACCTCACCAATCCCAAGGCTATGTGTTCTTCTGAACCATGGCCCTTCAATACTAGCCCTGAAATACAGCACAGGCACAAGCACTTCAACAAAGCAGTCTTTCAGGGTGAGCTACCTCATCAATAAATGTGGATTCTCTGCACAAGCTGCGTCAGAGCTTTCCAGTCATACCTCTTTCTTTAACTCTGAGAAGGCAGATGCTGTCCTTAAACTCTTAAGAAAGCTTAATTTTTCAGATTCTCAGTTACGTGATACCATTAAAAGGGCACCTGATATACTTTCAAGGGATCCTGTGAATACACTTTTGCCCAAGCTGGAGTTCTTCAAGTCTAAAGGGGCTTCTAGCTCCCAACTTGCCATGATCATTACCACTAATCCCTGGTCATTAGATAAAAGTTTGGTGAATCATATAATCCCTTGTTATGACTTAATAAAAAGCTTCCTTCATTCTGATGAAAGGACTATGAAGACTTTGAAAACATGTCCTAATCTCATAACTGATTATCGCCTGGCTCAGAAGGTTAAGCTCTTGCAGGACTACGGGGTGCCTGACTCAAGCGTTACTCGGCTATTTCGTTTTTGGCCTCTTATGATGAACTTCAAAATAGAGGAGTTTAAAAGTAATCTAGATGAATTAAAGGAATTGGGACTTCATCCTTCAAAAGCATCTTTCACAGATGCACTGCGTGCCAAATTAGTAGTAAGAGAATCGTCATGGAAAAGAAAGGTTGAGTTGTATAGGAGGTGGGGTTGGTCTGATGAAACATTTCTTAAGGCATTTATCAAACGACCTTGTTGTATGCTGAAATCTGAGAGTAAAATTGAGGCGATAATGGAGTTTTTTGTGAACTACATGGGTTGGGACTCTTTGGTGCTGTCTGAATACCCATTACTTTTCACTTTGAGTTTGGAGAAACGAATCATTCCTAGGGCTTCGGTCTTGCAGTTTCTTCAATCCAGAGATTTGATTGAGAAACAAGCTTATGCCAATTCCTTTTTTCTTACTGATGAATTGTTCTACAAGAAATTTGTGGCTCCCTTTAAGGATGAAGCTGTTGAGTTATTGAAGCTATATGAAGAGAAATTGAATCCTTCAAGATAA 2223 0.4116 MYACYRKSLFFLKAFTPTSSISLLPLFPKPSPSPLGHSYRTAESASEKLCFRTNYLINTCGFSPENASQLSRIVTFVKSDAPDAFLDLLKSLDLSDSVIRDTIKRAPRILSCDHARTITPKIEFFKSKGASSSQLARIVTFNPSFLLNSLENQIIPNYDLLRSLFHSDKKTVTSIQRCPRIVTDSYLAQKVKLLQDCGVSESHIARLIGHWPRVLCCGIDLLKRKADELLEMGFHPSKSTFIEALFAKVIISKSSWESKVELYRRWGWSEETLVEAFIRGPACIVSSCHKIDAVMDFLVTRMGWDSLYLAKNPALLYYSLEKRVVPRAFVLQFLQSRGAVHHLPPSYLSSDLRLLETMYDCYHKSLLYLKSFMRTSPIPRLCVLLNHGPSILALKYSTGTSTSTKQSFRVSYLINKCGFSAQAASELSSHTSFFNSEKADAVLKLLRKLNFSDSQLRDTIKRAPDILSRDPVNTLLPKLEFFKSKGASSSQLAMIITTNPWSLDKSLVNHIIPCYDLIKSFLHSDERTMKTLKTCPNLITDYRLAQKVKLLQDYGVPDSSVTRLFRFWPLMMNFKIEEFKSNLDELKELGLHPSKASFTDALRAKLVVRESSWKRKVELYRRWGWSDETFLKAFIKRPCCMLKSESKIEAIMEFFVNYMGWDSLVLSEYPLLFTLSLEKRIIPRASVLQFLQSRDLIEKQAYANSFFLTDELFYKKFVAPFKDEAVELLKLYEEKLNPSR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2963 740 Pfam mTERF 443 540 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 Pfam mTERF 86 180 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 Pfam mTERF 184 340 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 Pfam mTERF 540 713 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 631 662 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 562 592 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 136 168 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 172 200 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 493 524 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 663 697 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 SMART mt_12 457 488 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 Gene3D Transcription termination factor 3, mitochondrial 185 377 IPR038538 -
Sto10g2963 740 Gene3D Transcription termination factor 3, mitochondrial 506 725 IPR038538 -
Sto10g2963 740 Gene3D Transcription termination factor 3, mitochondrial 64 184 IPR038538 -
Sto10g2963 740 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 387 737 - -
Sto10g2963 740 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 45 348 - -
Sto10g2963 740 PANTHER CGI-12 PROTEIN-RELATED 45 348 IPR003690 GO:0003690|GO:0006355
Sto10g2963 740 PANTHER CGI-12 PROTEIN-RELATED 387 737 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2963 Sto-Chr10 39441869 39448058 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto10g2963 mTERF 3.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2963 K15032 - gmx:102663105 303.523