Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2945 ATGGCGTCTCTACTACCGTCCGCGCCAAACATAGCCTCTGCTCCTTTCTCTTACCGCACGACCACAACGACGAGTCCTCTCCTCCATCGACCTCACCACTACCGCCACAACCTCTTCCATTCCAGGCACTTCCTTCGCGGTTCGCTCACCGTTGCTAGGTTCGGCTTCAAGCCTGATTTCCTTCCCGAGCCTCATGGCGCCGAGGAGCTCATCAAGGACCTGTTCAATCGAGCTGACGCTTTACTATACACTATCGCCGATGCCGCCGTTTCGTCCTCCGATACGGTTGCAACTACCGCCAAACAGAACAACGATTGGCTATCCGGTATTACCGGTTACATGGAGAGTGTTCTCAAGGTACTCAAGGATGGGCTTTCTACTTTGCACGTACCATATGCTTATGGTTTTGCAATTATACTCCTCACAGTTTTGGTTAAGGCTGCCACATTTCCGCTGACAAAGAAACAGGTAGAATCTTCCTTGGCTATGCGGTCTTTGCAACCTCAAATAAAGGCTATTCAGCAACGTTATGCTGGTGATCAGGAAAGAATCCAACTTGAGACTGCTCGGTTGTATAAATTGGCTGGAATTAATCCTCTAGCAGGATGCCTCCCTACACTTGCAACAATACCTGTGTGGATTGGGTTATATAGAGCACTTTCAAATGTAGCAGATGAGGGATTACTTACAGAGGGTTTCTTCTGGATTCCTTCTCTTGCTGGTCCAACTACAATAGCTGCTCGTCAAAATGGGAGTGGTATCTCTTGGCTTTTCCCTTTTGTGgaTGGTCACCCACCCCTTGGATGGTCAGATACATTGGCTTACCTTGTATTGCCTATATTGCTGGTTGTCTCCCAGTACATCTCTGTCCAAATAATGCAGTCCACACAGCCTAATGATCCCAACATGAAGAGTTCTCAAGCCCTAACCAAGGTCCTTCCATTAATGATTGGTTACTTTGCTTTGTCGGTTCCTTCTGGTCTAAGCCTTTATTGGTTCACAAATAATATATTGAGCACAGCACAACAAGTATGGCTTCAAAAACTTGGAGGAGCCAAAAACCCTGTGATGCAAGTACGTGATGATACAATGAAGGACGACCTAATGCAGGTTCAGAAATCAGTCTCTGAGCTAAATACCACAAAAAAGGAGGCCAGAGAAGGTGAAAAGTTGACATTGCAGGGGCCAAAACCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAAGCTAGGAGAAGAcaacaaagagaagaagaagaaaaaaagaaagctgAGGATGCATCAGCTAAAGCAACTAATGTACATGAGGTTGGAGATTatttagttgttgaaaaatCTCAGGCTGTAACTGCGGAGAATGATCCATCCACTTCTGGTGTTGTTGTAAATGGGAATCCATCCAATGAAGATTTAGAGAGACATCAGAATGCTACATCTACACCTCAGATAGAAAATAATGATGATTCTGCTAATTTCCAGATTAATGaaaggaatgagaaaagtcTAGAAAAGGAAACAATAGATTTATACACAACTACAGCTGCCACAGAGAAGAAGCCTCCTGCAGAAGACCCAGAACACGTGACAAAGGATTGA 1596 0.4323 MASLLPSAPNIASAPFSYRTTTTTSPLLHRPHHYRHNLFHSRHFLRGSLTVARFGFKPDFLPEPHGAEELIKDLFNRADALLYTIADAAVSSSDTVATTAKQNNDWLSGITGYMESVLKVLKDGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPILLVVSQYISVQIMQSTQPNDPNMKSSQALTKVLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAKNPVMQVRDDTMKDDLMQVQKSVSELNTTKKEAREGEKLTLQGPKPGDRFKQLKEQEARRRQQREEEEKKKAEDASAKATNVHEVGDYLVVEKSQAVTAENDPSTSGVVVNGNPSNEDLERHQNATSTPQIENNDDSANFQINERNEKSLEKETIDLYTTTAATEKKPPAEDPEHVTKD 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2945 531 Pfam 60Kd inner membrane protein 134 348 IPR001708 GO:0016021|GO:0032977
Sto10g2945 531 PANTHER OXA1 50 470 IPR001708 GO:0016021|GO:0032977
Sto10g2945 531 MobiDBLite consensus disorder prediction 449 531 - -
Sto10g2945 531 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 134 348 IPR028055 -
Sto10g2945 531 Coils Coil 402 434 - -
Sto10g2945 531 PANTHER BNAA09G28180D PROTEIN 50 470 - -
Sto10g2945 531 MobiDBLite consensus disorder prediction 379 432 - -
Sto10g2945 531 MobiDBLite consensus disorder prediction 449 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2945 Sto-Chr10 39277169 39282332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2945 50 416 Chloroplast and Mitochondria Gene Families AT2G28800 54.960 2.15e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2945 K03217 - gmx:100802546 729.939