Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2936 ATGAAATTATCTTTCAGCCCTTTTGCTCCTCTTTTCTTGTATTTCATGGAATGGATGGATTTTAGTTGTACACATTCTTTATCATCTTCTTTGGGCTTATACCACATCCTTATACACAAGGTATACCTTGATGGAATGCCATCCTTATCCtccaaagaaagaaaagccaCTCTCAAAGATTTCTATGCTGTAATATACCCTTCATTGAGGCTACTTGAAGAGGAGTTTAATGCATCAAAAATTAATGACCATAGAAGTAATTGCAGTACAGAAGTTATGAGCAGAAAAAGGGGTTTTGATAAAGATCAAGAGAGAGATGATGAATGTGGTATATGTATGGAAACCAGCATGAAGATGGTGTTACCTAATTGTGGCCATTCCTTATGCATTAGCTGCTTCCATGACTGGAATGTGAGATCAGAATCATGCCCATTTTGCCGTGGAAGCTTGAAGAGGGTGAGTCCAAGAGATTTATGGGTTGTAATAGGCAATAATGATGTAATTGACACTATCACTCTTGCCAAAGACAATTTAAGACGCTTCTATCTTTACATGGAATCACTCCCTCTTATTATGCAAGATGCACATGTCTTTGTGTGTAATTACAtgctatga 615 0.3561 MKLSFSPFAPLFLYFMEWMDFSCTHSLSSSLGLYHILIHKVYLDGMPSLSSKERKATLKDFYAVIYPSLRLLEEEFNASKINDHRSNCSTEVMSRKRGFDKDQERDDECGICMETSMKMVLPNCGHSLCISCFHDWNVRSESCPFCRGSLKRVSPRDLWVVIGNNDVIDTITLAKDNLRRFYLYMESLPLIMQDAHVFVCNYML 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2936 204 PANTHER RING-H2 FINGER PROTEIN ATL47-LIKE 1 204 - -
Sto10g2936 204 SMART ring_2 109 146 IPR001841 -
Sto10g2936 204 Pfam Zinc finger, C3HC4 type (RING finger) 106 152 - -
Sto10g2936 204 PANTHER RING FINGER PROTEIN 41, 151 1 204 - -
Sto10g2936 204 ProSiteProfiles Zinc finger RING-type profile. 109 147 IPR001841 -
Sto10g2936 204 SUPERFAMILY RING/U-box 58 152 - -
Sto10g2936 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 156 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2936 Sto-Chr10 39224264 39227404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2936 92 155 C3H Transcription Factor Family AT2G42030 39.437 8.93e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2936 - - adu:107481966 301.982