Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2896 ATGGGCTGGCCCATTTTGGGGACTTTACCTCAAATGGGCTCATTGGCCCATAGGAAACTTGCTGGCTTAGCCACTTCACTAAGAGCGGAACGGCTCATGGCGTATAGCCTCGGCGCCATGCCTGTCATCATCGCGAGCCACCCAGATACGGCTCGGGAAATCCTATGTGGCTCGGCGTTCTCGGACCGGCCCATTAAAGAATCGGCTCGTTTGCTCATGTTTGAGCGTGCCATTGGCTTTGCTCCCGGGGGCGAGTACTGGCGCCGCCTCCGTAGGGTCGCGGCCACCCACTTGTTCTCTCCGAGGAGAATCTCCGACCAAGAGGGGCTCCGGCAACACGTGGCGGAGGAAATGGTGAGGAGAGTGTGGGAGGAGATGGAGGAGAAGGGGGTTGTGGAAGTTAAGGGGATATTGCAAGAAGGGTCATTGAGGAATATATTGGAGGGTGTTTTTGGAAATTGCAAGGGGTCAGAGAGGGAAGAGTTAGGTAATATGGTTAAGGAAGGGTATGAGTTGATAGTTAAGTTTAATTGGGAAGATTATTTTGGGTTCAAATTTTTGGACTTTCATGGGGTAAAGAGGAAATGTCATAAACTGGCGGCTAAGGTTAAGAAATTGGTGGGTCAAATTGTGGaagatagaaaaagaagaagagagtttgTTAGAGttgaagagaatgagaatgattttcTTAGTGCTCTCCTATCCTTACCTAAAGAGGAAAGGTTAGGTGATTCGGATATGGTTGCTATTTTGTGGgaaatgaTATTTCGAGGAACAGACACAGTTGCTATATTGCTTGAATGGATCATGGCCAGGATGGTTTTACACCAAGACATACAATCCATAGCTCGTCAAGAGATTCACATGTGCATTGGCCAACGTAGTCACGTGCGAGATTCTGACATTCCAAATCTCCCTTACCTTCAAGCCATAGTGAAAGAAGTTTTTCGCCTACACCCACCGGGCCCATTGCTCTCGTGGGCCCGCCTCGCTACCCATGACGTCCACGTGGACAAGCTTTTTGTGCCAGCTGGCACAACTGCAATAGTTAACATGTGGGCTATAACACATGACTCAGCTATATGGGAGGATCCGTGGGCTTTTAAGCCCGAGCGGTTTATGGAAAAAGAAGTATCTATTATGGGCTCGGACTTGAGGCTTGCACCGTTTGGTGCTGGACGTAGGGTATGTCCTGGAAGGGCGTTAGGGCTAGCCACGGTTCATCTTTGGCTCGCACAACTTCTTCATAGTTTTGTATGGCTACCCGTAGAACCTAATGTAGGTGTGGATCTTTCTGAGTGTCTTAGGCTTTCTCTTGAAATGAAAAAGCCTCTGCATTGTCAAGTAATCCGTAGATCTCAACTCTATGAAGCATGTAATTAA 1386 0.4675 MGWPILGTLPQMGSLAHRKLAGLATSLRAERLMAYSLGAMPVIIASHPDTAREILCGSAFSDRPIKESARLLMFERAIGFAPGGEYWRRLRRVAATHLFSPRRISDQEGLRQHVAEEMVRRVWEEMEEKGVVEVKGILQEGSLRNILEGVFGNCKGSEREELGNMVKEGYELIVKFNWEDYFGFKFLDFHGVKRKCHKLAAKVKKLVGQIVEDRKRRREFVRVEENENDFLSALLSLPKEERLGDSDMVAILWEMIFRGTDTVAILLEWIMARMVLHQDIQSIARQEIHMCIGQRSHVRDSDIPNLPYLQAIVKEVFRLHPPGPLLSWARLATHDVHVDKLFVPAGTTAIVNMWAITHDSAIWEDPWAFKPERFMEKEVSIMGSDLRLAPFGAGRRVCPGRALGLATVHLWLAQLLHSFVWLPVEPNVGVDLSECLRLSLEMKKPLHCQVIRRSQLYEACN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2896 461 Gene3D Cytochrome P450 1 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 1 454 - -
Sto10g2896 461 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 391 400 IPR017972 GO:0005506|GO:0016705
Sto10g2896 461 PANTHER CYTOCHROME P450 78A7-RELATED 1 454 - -
Sto10g2896 461 Pfam Cytochrome P450 3 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS E-class P450 group I signature 26 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS E-class P450 group I signature 247 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS E-class P450 group I signature 267 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS E-class P450 group I signature 310 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS E-class P450 group I signature 352 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS E-class P450 group I signature 388 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS E-class P450 group I signature 398 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 SUPERFAMILY Cytochrome P450 2 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS P450 superfamily signature 258 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS P450 superfamily signature 311 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS P450 superfamily signature 389 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2896 461 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2896 Sto-Chr10 38901016 38903235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2896 13 454 Cytochrome P450 AT1G13710 55.947 6.31e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2896 - - gmx:100799715 693.345