Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2887 TTGAAATGTGAACCACAAGAGCCAGATTTTCCTGATTCCAGTTCCCAGAAGAATGGATCGCTGTTGGGAACAGCGAAGGCTTCTTTTCTTAGTGGGAGGAAGTTGAAGGTAAACAAGTTTACAAGGCAAGTGGGAGGAAGAACTAGAGTGTGTGCAGCTGCAGCTGATCCTGATAGACCTCTCTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTTGATGGCAGCCTCCCTGGAGACTTTGGCTTTGATCCTCTTGgtcttgCATCTGATCCCGAGAGCTTGAGATGGAATGTACAAGCAGAGCTAGTGCATTGCAGATGGGCAATGCTAGGGGCTGCAGGGATATTCATTCCGGAATTCCTTACAAAGATTGGCATTCTCAACACTCCTTCTTGGTACACTGCTGGAGAGCAGGAATACTTCACAGACACCACCACACTCTTCATTGTTGAGCTCATTTTCATTGGATGGGCCGAGGGGAGAAGATGGGCCGACATCATCAAGCCCGGATGTGTCAACACGGATCCCATCTTCCCCAACAACAAGCTCACTGGGACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCACTGGGTTGGGGATCAGGCTCTCCTGAGAAGATCAAGGAGTTGAGAACCAAAGAGATAAAGAATGGAAGATTGGCCATGTTGGCTGTGATGGGAGCTTGGTTCCAGCACATTTACACTGGCACTGGTCCTATTGATAACCTTTTTGCTCACCTAGCAGATCCTGGCCATGCCACCATTTTTGCTGCTTTCACACCCAAGTGA 795 0.4931 LKCEPQEPDFPDSSSQKNGSLLGTAKASFLSGRKLKVNKFTRQVGGRTRVCAAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2887 264 Gene3D Chlorophyll a/b binding protein domain 69 254 - -
Sto10g2887 264 Pfam Chlorophyll A-B binding protein 68 234 IPR022796 -
Sto10g2887 264 SUPERFAMILY Chlorophyll a-b binding protein 52 262 - -
Sto10g2887 264 MobiDBLite consensus disorder prediction 1 20 - -
Sto10g2887 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 25 264 IPR001344 GO:0009765|GO:0016020
Sto10g2887 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 25 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2887 Sto-Chr10 38838165 38840830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2887 50 264 Chloroplast and Mitochondria Gene Families AT3G61470 93.023 3.79e-150 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2887 K08908 - gmx:100802138 500.36