Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2876 ATGGCAGAAATGGTGGGgaagacagcaagtacaggccAATTGAGTTTTAGGAGATTGAATAGAGAGAAGGATGGGGAGAAAGAAGAGGTCATTGATGTGGATAAgctgaagaagatgaagcaagACAAGGTTTCTGCTTGGACTATGAGAGGATTGATTCATGTGATAAGGAGTTCTGGGTTGTCCACCATTTCTGATTCACTTGAGAATTTTAAGGAAGATGAAGGAGAGCAGAAAGACAAGGAGATTAATAGTGAGTGGGAAGCAAAAGCAGCTGCTTATAGAATCTTCAAGAATGTAGCCAAGCCAGGAAGCAGGTATATTGATGAGGAGGATCTGTTGAGATTTATGAGTAAAGAGGAAGTGGAGAATGTGCTTCCTTTGTTTGAAGGAGCTGTGGAAACTGGAAAAATAAAGAGGAAGTCCCTCAAGAACTGGCTGGTGAAAGTGTACCTTGAACGAAAATCGCTGGTACATTCCTTAAACGACACGAAAACAGCAGTGGACGAGCTGAACAAGCTAGCATCAGCCATGGTTCTGGTCATCATCTTCATCGTTTGGCTACTTCTAATGGGATTTCTCACAACCCAGGTTCTTGTCTTCATTTCCTCACAGCTTTTGCTTGCTGTCTTCATGTTTGGCAACACAGCCAAGACTCTCTTCGAAGCCATCATTTTCGTTTTCGTCATGCACCCTTTTGATGTTGGAGATCGCTGTGTCATTGATGGCGTACAGATGATTGTGGAAGAGATGAATATATTGACGACAGTGTTCTTGAGATATGATAATGAGAAGATATTCTatccaaattctgttctggcaATCAAACCAATCAGCAATTTCTACAGAAGCCCAGATATGAGTGACTCTGTTGAATTCGCTATTGATGTTTCTACTTCAATGGACACCATTGCTGCTCTCAAAGCAAGAATTAAAGCATACTTGGAGAGCAGGCCTCAGCACTGGCGTGCAGGACACAGTGTGGCATTCAAGAGCATAGAGAACGTGAACAAGATGAATATGGCTCTCTATGTAACTCACACCATTAATTTCCAGAACTATGGAGATAAGAGCAGCAGAAGATCGGAGCTTGTGTTGGAGTTGAAGAAAATTTTCCATGATCTTAATATCACTTACCATCTTCTCCCACAAGATGTTCATCTCACTTATGTGGGAGTGGGACCACCAGATGCTGATAAAGAGGTGATGATGGCGACGAGTTTCGATGCAGATGGAGAAGCTTCACTTGTGGAgcccagagagagagagagatga 1275 0.3961 MAEMVGKTASTGQLSFRRLNREKDGEKEEVIDVDKLKKMKQDKVSAWTMRGLIHVIRSSGLSTISDSLENFKEDEGEQKDKEINSEWEAKAAAYRIFKNVAKPGSRYIDEEDLLRFMSKEEVENVLPLFEGAVETGKIKRKSLKNWLVKVYLERKSLVHSLNDTKTAVDELNKLASAMVLVIIFIVWLLLMGFLTTQVLVFISSQLLLAVFMFGNTAKTLFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDNEKIFYPNSVLAIKPISNFYRSPDMSDSVEFAIDVSTSMDTIAALKARIKAYLESRPQHWRAGHSVAFKSIENVNKMNMALYVTHTINFQNYGDKSSRRSELVLELKKIFHDLNITYHLLPQDVHLTYVGVGPPDADKEVMMATSFDADGEASLVEPRERER 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2876 424 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 391 IPR016688 -
Sto10g2876 424 Pfam Mechanosensitive ion channel 173 377 IPR006685 GO:0016020|GO:0055085
Sto10g2876 424 Gene3D - 232 281 IPR023408 -
Sto10g2876 424 SUPERFAMILY Sm-like ribonucleoproteins 222 281 IPR010920 -
Sto10g2876 424 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 3 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2876 Sto-Chr10 38797529 38800007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2876 2 389 Mechanosensitive Ion Channel Family AT5G12080 58.098 2.29e-163 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2876 K22048 - qsu:112023488 632.484