Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2875 ATGTTCGGAGAATTCTTATTGAAACTTCCCTTTTGGGTCTTTTCCTCAGTAAAGTTTGCATCTTTTGTTGTTGGGTATGGTGGGTCCACCAATCTTGATTTTGGCTTGGAGAACTCCGACCTCCGCACCGACGACCGCCGTTTATTCAACGGTGGCTCACTTGATTCCGGCGACTCTGTTGATTTTGGCACTTTAGAATCTTTGATTTCTTTGTTTGAAGACGAagaagcttcttcttcttcgttgtCTATTAGTTGCAGAACGACTTCCTTTTTGAACCCTTTTGTGTCtttgccttcttcttcttccatgacAAGAACGCAACTTGGGAAGTGCTTAACTTCTTCCTCCCCACTCTCAAATTCAGACCAGAAATCCAACATGCCTATGTTGTACTATGGCCTAGTGGTGGTCGCAACCGCCGCCATAGTACTAGCTGTGTACAACCTTATTGTCATCAAAAGGTGTGGCCGCCGCCACATGCCGCCGCCGTCACAGCCCACGAATATTGGGGTGGTTGAAGAGAGGAGGAGTTTGAGCAGAAATTTACTCTCGAGCTTCAAGTACAagaaagaagcagaagaagaagaagaagaaggagaagggggATTAGGAATTAGTAGAAGATCAGGAAGAGATTGTGAGGAGGATTCGTGTGCTGTGTGCTTGTCGGGGtttgaggaaggagaagaagtgaGGAAGCTTCCGAGGTGTAACCACTGCTTTCATGTTATGTGTATAGACATGTGGCTCTACTCTCACTTCGATTGTCCCATTTGTCGCACTCCGGTCGTTGCCGCCTTTTCTCGGAGTTCCGGCGACGAAAATGCCGTTGCCGTTGCTGTTTCTGTTTGA 855 0.414 MFGEFLLKLPFWVFSSVKFASFVVGYGGSTNLDFGLENSDLRTDDRRLFNGGSLDSGDSVDFGTLESLISLFEDEEASSSSLSISCRTTSFLNPFVSLPSSSSMTRTQLGKCLTSSSPLSNSDQKSNMPMLYYGLVVVATAAIVLAVYNLIVIKRCGRRHMPPPSQPTNIGVVEERRSLSRNLLSSFKYKKEAEEEEEEGEGGLGISRRSGRDCEEDSCAVCLSGFEEGEEVRKLPRCNHCFHVMCIDMWLYSHFDCPICRTPVVAAFSRSSGDENAVAVAVSV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2875 284 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 267 IPR013083 -
Sto10g2875 284 SUPERFAMILY RING/U-box 213 267 - -
Sto10g2875 284 MobiDBLite consensus disorder prediction 192 211 - -
Sto10g2875 284 ProSiteProfiles Zinc finger RING-type profile. 219 261 IPR001841 -
Sto10g2875 284 PANTHER RING-H2 FINGER PROTEIN ATL52-LIKE 117 272 - -
Sto10g2875 284 Pfam Ring finger domain 217 261 IPR001841 -
Sto10g2875 284 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 117 272 IPR044675 -
Sto10g2875 284 SMART ring_2 219 260 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2875 Sto-Chr10 38787239 38790685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2875 134 283 C3H Transcription Factor Family AT5G17600 33.121 1.85e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2875 - - aprc:113852327 174.481