Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2872 ATGGCTACTCTTGCTGTTTGTCTCTCTTCTTCCAAATCCAAATCCACTATGTTTAAAAGAATAAGAGCCGCTTTTTCTTTGAGAGCAGaCCCACACAAAGATTCAGCTTTGGAGACAATAGCAGCAAAAGGTCTCAAGGTTTTTCCTTTTCAAACCTTATCTCTTGCTACCAAAAATTTCTCTAACTTCATTGGTAGTGGCGGCTTTGGATCTGTCTACGGGGGGAGGTTGGAAGATGAGACAGAGATTGCAGTTAAGAAGTTGCACAATGTGTCACCACAAGGGAGAAGTGAGTTCCTCAAAGAGGCCGAGGTGTTGTCTGGCGTGCAACATCGCAATGTTGTCAAACTTTTGGGATTTTGTATTCATAACAATGATTCTTTACTTGTTTATGAATTTCTTCCCTATACTCTTGACAAGTTGTTATTCGGTAGCAATCACACAAAGCATCTTGATTGGACACAGAGGTTTAGGATAATCACACATATAGCCATAGGTTTGCGATATCTTCACAATGAAACCAGACATCACATTGTCCACCGTGACATGAAGCCCAACAATATCTTGCTTGATGAAAAGTTGATGCCAAAAATTGCTGATTTTGGCCTTAGCCGTTTCTTTCCAGAAGATCACACCCATATCACTGCCACAAATAATCCTGGAACTGGTTCTAAACTGGCTTCAGCATCTGAATTCTGTTTTGTTTGTGCCGTCTCAATATTTACAACATCTCTACAACTTGGAAACTGGGCTGTACCTGCACTGGGATACATGCCTCCGGAGTACATGGAACTTAAGCATGTGTCAGTAAAGATGGACTCATATAGCTTTGGTGTTCTGATGTTGGAGAGTATTAGTGGAAAGCGAAACTCTGAATTCCTTCCACCGCCGCTCTCACAGGGGGAAAAAATTCATGCAATCTGCCTGCTTGATTGGGCATATGAACTTCACAGAAGAGGCAGGAGCTTAGAATTATTGGACCCTACCATAGCAGCTCTCACAGTCAAAGACACTGAGCAAGTGACAAGGTGCATTGAAATAGGTTTGTTATGCGTTCAAGGTGTTCCAGCGGAACGTCCCGACATGGAGGTTGTCGTGTCCATGTTAATGATGAACCATGGCCGTAGAGAAGCATCTACTATTCTCAGACCGGGAGTCTTGGGTTATCATGATCATCGGTATGGCAATGGCAGATTTTCTGGTCAAGATAAGAGTGATGAAAAAGCAACACAAAGTGAAGGTAATGAATCTGAAGCACAAGTGAATATGCGAGTAGACGCCATGAATgactcattctcatttcctgtCCAAGAGAGTGGTGGTCCTAacaaagatgaagaagaacccTTACATTCGGGTGGTCTCAATTCAACCCCTAAAGTCTCCAGCATAAGCATGGCCAAGACACAGACATCTTCCATGGATGCTTACACTGAATGGATTGAACAAGATGAACCTGGGGTTTACATTACTATCAGAGCATTGCCCGGTGGCGAAAGGGAAATAAGACGAGTCCGATTCAGCCGAAGAAGATTTGGGGAGATGCAGGCTACATCGTGGTGGGAAAAGAACCGGGCGAGAGTAAATGCACAATACTTGTGA 1602 0.4232 MATLAVCLSSSKSKSTMFKRIRAAFSLRADPHKDSALETIAAKGLKVFPFQTLSLATKNFSNFIGSGGFGSVYGGRLEDETEIAVKKLHNVSPQGRSEFLKEAEVLSGVQHRNVVKLLGFCIHNNDSLLVYEFLPYTLDKLLFGSNHTKHLDWTQRFRIITHIAIGLRYLHNETRHHIVHRDMKPNNILLDEKLMPKIADFGLSRFFPEDHTHITATNNPGTGSKLASASEFCFVCAVSIFTTSLQLGNWAVPALGYMPPEYMELKHVSVKMDSYSFGVLMLESISGKRNSEFLPPPLSQGEKIHAICLLDWAYELHRRGRSLELLDPTIAALTVKDTEQVTRCIEIGLLCVQGVPAERPDMEVVVSMLMMNHGRREASTILRPGVLGYHDHRYGNGRFSGQDKSDEKATQSEGNESEAQVNMRVDAMNDSFSFPVQESGGPNKDEEEPLHSGGLNSTPKVSSISMAKTQTSSMDAYTEWIEQDEPGVYITIRALPGGEREIRRVRFSRRRFGEMQATSWWEKNRARVNAQYL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2872 533 Pfam Protein kinase domain 62 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2872 533 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Sto10g2872 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Sto10g2872 533 MobiDBLite consensus disorder prediction 432 462 - -
Sto10g2872 533 Pfam Transcription factor regulating root and shoot growth via Pin3 478 532 IPR013591 -
Sto10g2872 533 ProSiteProfiles Protein kinase domain profile. 58 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2872 533 PANTHER RECEPTOR-LIKE KINASE 256 420 - -
Sto10g2872 533 PANTHER RECEPTOR-LIKE KINASE 12 227 - -
Sto10g2872 533 MobiDBLite consensus disorder prediction 393 419 - -
Sto10g2872 533 SUPERFAMILY Protein kinase-like (PK-like) 37 371 IPR011009 -
Sto10g2872 533 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 227 - -
Sto10g2872 533 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 256 420 - -
Sto10g2872 533 Gene3D Transferase(Phosphotransferase) domain 1 136 381 - -
Sto10g2872 533 MobiDBLite consensus disorder prediction 396 413 - -
Sto10g2872 533 Gene3D Phosphorylase Kinase; domain 1 21 133 - -
Sto10g2872 533 ProSiteProfiles BRX domain profile. 478 533 IPR013591 -
Sto10g2872 533 SMART serkin_6 58 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2872 Sto-Chr10 38763938 38771458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2872 48 369 Receptor kinase-like Gene Family AT4G11530 43.077 6.53e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto10g2872 Pkinase 2.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2872 - - mnt:21395222 301.597