Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2871 ATGCTTACGTGCATAAATCGTCCCAAGAGACTCGGGAATGACTCACTGGGTCATCATCACAACGAAGAATCCGATTCCGCCAAAACTCATCCCGCAACCAAATCCCTTACTTCTCAGctCAAGGATATGGCGCTGAAGGCGTCGGGGGCTTATAAGCATTGCACGCCCTGCGCTCGGCTCCGGAGCAATTTTACGGAGTCGTCGCCGTCGGACGCGGATTCGGATCGGTTCCGGTGGTCGTACCGGCGAACGGGGAGTTCGAATTCGACGACGACGAGGGGGTGGGGGAAGGAGATGGAGGCGAGGCTGAAGGGGATATCGAGTGGGGAGGGGACGCCGAGCTCCGGCAGCGGGCGGCGGGTGGAGGCGGTGGTGCTGTTCGTGGAGGAGAACGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCGGGGGTTTTGATCACTTTTGTTTCGCTTCCGAGCGGAGGGAATGATTTGAAGCGGATACGTTTCAGTCGGGAAATGTTTAACAAATGGCAAGCTCAAAGATGGTGGACAGAGAATTATGACAAGGTCATGGAACTTTACAACGTTCAAAAGCTTAACCGCCAAGCTTTCCCTCTTCCGACGCCACCACGATCCGAAGACGAGAGCTTAAAGCTTGAATCGGTTGAAGATAGTCCCGTGACACCTCCATTGAACAAAGAACGGTTACCGCGAAATTTGCACCGTCCGACCGGGATGGGTGGCCTCAATTCAACCCCTAAAGTCTCCAGCATAAGCATGGCCAAGACAGAGACATCTTCAATGGATGCTTCCATCCGAAGTAGCTCATCTAGAGAGGCCGATCGGTCGGGGGATATATCCATCAGCAATGCCAGTGATGTTGACACTGAATGGGTTGAGCAAGATGAACCTGGGGTTTACCTTACTATCAGAGCATTGCCTGGTGGCAAAAGGGAACTAAGACGGGTCCGATTCAGCCGAGAAAGATTTGGGGAGGTGCATGCTAGATTATGGTGGGAAGAGAACCGGGCGAGAGTACATGCACAATACTTGTGA 1038 0.5376 MLTCINRPKRLGNDSLGHHHNEESDSAKTHPATKSLTSQLKDMALKASGAYKHCTPCARLRSNFTESSPSDADSDRFRWSYRRTGSSNSTTTRGWGKEMEARLKGISSGEGTPSSGSGRRVEAVVLFVEENEPKEWVAQVEPGVLITFVSLPSGGNDLKRIRFSREMFNKWQAQRWWTENYDKVMELYNVQKLNRQAFPLPTPPRSEDESLKLESVEDSPVTPPLNKERLPRNLHRPTGMGGLNSTPKVSSISMAKTETSSMDASIRSSSSREADRSGDISISNASDVDTEWVEQDEPGVYLTIRALPGGKRELRRVRFSRERFGEVHARLWWEENRARVHAQYL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2871 345 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Sto10g2871 345 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 345 - -
Sto10g2871 345 MobiDBLite consensus disorder prediction 12 29 - -
Sto10g2871 345 Pfam Transcription factor BRX N-terminal domain 28 57 IPR027988 -
Sto10g2871 345 MobiDBLite consensus disorder prediction 239 268 - -
Sto10g2871 345 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 345 IPR044532 -
Sto10g2871 345 ProSiteProfiles BRX domain profile. 290 345 IPR013591 -
Sto10g2871 345 MobiDBLite consensus disorder prediction 199 282 - -
Sto10g2871 345 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Sto10g2871 345 Pfam Transcription factor regulating root and shoot growth via Pin3 290 344 IPR013591 -
Sto10g2871 345 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2871 Sto-Chr10 38757172 38760812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2871 1 345 Major Intrinsic Protein MIP AT1G31880 44.780 4.60e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2871 - - gmx:100794109 514.227