Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2869 ATGAGGAAGATTCGAGTTCTATACACAGACCCAGACGCTACGGAGTCTTCAagcgaagaagaagaggaaaacgGGAGGAGCAAGCGATTCGTGAAGGAGATTCTGGTTCCCACAACGAGAaaggcatcatcatcatcatcgtgtGGTGGTGGTGAAACGACCAGAATGGGCCCCGCCGGGAGAGGGAAATTGTCGAGAGGGGTACGACGTAGGAAGTGGGGGACTTACGTGGCGGAGATCCGAGATCCGATTCGTGGGGTCCGGATGTGGCTTGGGACGTACAGTACCGAGGAAGAAGCTTCTAAGGTGTACGAGAGAAAGAGGAAGGAATTCGAGAGGTTATTATTAGAGTcacaacattcatcatcatcattatcatcatcatcatcgacATCATTATTATCATCGTCGTGTGTGGTTGAAGCTTATAATGTGAAAGAAGCCGAAGAAGAGGAGTCAATGATTAAGTGTTTGTTAGAGGAGCCAGTTATGCCAGTGTTGGAGATTGATGGTGATGGAGGCTGTGTTTGGGAAATGGGAAACCAAAATGGTAATGGTAATGGTGGTGAAGGaataatgagtgtttcaagcaGTAGTGTTACTCTTGAGAGTGAATTTAGTGACCCAGAGTTGGCTTGGATTGATGAAGCTTTGAATAACCAAGGATTTACGAAGGCGAAGAATCTGAGTGCATATAAGGAAACTACAGAATTACCAGATATAATCAACAGTTCCCATGAACTTGGAGTGGTAAGATGTTGCCAAGGGCTCCCCAATATCGTCCCTCGTTCTATAGTTTCCCTGAAGTAG 810 0.4062 MRKIRVLYTDPDATESSSEEEEENGRSKRFVKEILVPTTRKASSSSSCGGGETTRMGPAGRGKLSRGVRRRKWGTYVAEIRDPIRGVRMWLGTYSTEEEASKVYERKRKEFERLLLESQHSSSSLSSSSSTSLLSSSCVVEAYNVKEAEEEESMIKCLLEEPVMPVLEIDGDGGCVWEMGNQNGNGNGGEGIMSVSSSSVTLESEFSDPELAWIDEALNNQGFTKAKNLSAYKETTELPDIINSSHELGVVRCCQGLPNIVPRSIVSLK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2869 269 MobiDBLite consensus disorder prediction 20 35 - -
Sto10g2869 269 Gene3D AP2/ERF domain 66 114 IPR036955 GO:0003700|GO:0006355
Sto10g2869 269 SMART rav1_2 64 123 IPR001471 GO:0003700|GO:0006355
Sto10g2869 269 Pfam AP2 domain 65 113 IPR001471 GO:0003700|GO:0006355
Sto10g2869 269 PANTHER OS01G0224100 PROTEIN 1 221 - -
Sto10g2869 269 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 221 - -
Sto10g2869 269 SUPERFAMILY DNA-binding domain 65 111 IPR016177 GO:0003677
Sto10g2869 269 MobiDBLite consensus disorder prediction 38 52 - -
Sto10g2869 269 CDD AP2 66 106 IPR001471 GO:0003700|GO:0006355
Sto10g2869 269 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Sto10g2869 269 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Sto10g2869 269 MobiDBLite consensus disorder prediction 1 66 - -
Sto10g2869 269 ProSiteProfiles AP2/ERF domain profile. 64 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2869 Sto-Chr10 38742324 38744955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2869 1 158 AP2-EREBP Transcription Factor Family AT1G68550 36.257 7.94e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto10g2869 AP2 8.6e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2869 - - aprc:113866790 119.783