Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2851 TTGCATAAGAAGACGAAAAAGGATCAGAACAGAGTGTCACGTATTGTTGATTCAGCTTACGACAGACTCGACTCCcttttccgtttctatttcttcCAATTTCCAATACGCTTAAacccttctctttctcttattgAAGTAGAATCAGATTCAGCGTTGAGACTAGAGGAGgtattcgcagtttcttggagGTTTCTTGATGGCGAACAACTTAGCGGGGCAGCTCTCGGGCTCAGAGATTCATGGATTCCATACATTGCAAGGAAGATGCTTAGGAACTTCCGTAAAGATGGGCACAAttggagaaagaaaaaggaCGGGAAAACTGTCAACGAAGCTCACGAGCACTTAAAAGTTGGTAATGAAGAAAGAATCCATGTATACTATGCACATGGCCAAGAAAACCCGAGCTTTGTTCGGagatgttattggttgcttgaTAAGAGTCAGGAAAACATAGTCCTTGTTCATTATCGGGAAACACAGGAGTTGCAAGGTTCTCCAGTCACACCTGTATATTCAAATTCAAGTTCTGCCTCGGAATCGACCACACCATGGATATTATCAGAAGAATTAGATTCTCGGATCAACAAGGCTTATACTGGTGAGCTAAATGACAATTCAACTGTCAGAAGTCATGAACTGAGGCTTCATGAGCTTAATACACTTGAATGGGATGAGCTGGTGGTTGCAAATGATCTTAAGACCTCTACTACTTCTACTCCTGCTGGAGGAAAGATTCCATATTTTCATCAAGAGAAGCAAATTGGAACATTGAGCAGGGATGTTTATGTCTTTTTTCTACGTGGGGCTCTTGCTGATATATCTGCCGATGAGTGGAGATATTTACTTCTTGATTCTTATGTTGCTAATGTTGCGTGTAGTACTATAGATGTTATGAAATGTTGTCAGCAAATTAATATGACAAATGTAGCCAATAATTCAGCTGCTGGAATTCATTCTTTTGATAATTTAGGCAACCCTGTTGATGGGAGCAATAGTGCTCCTTACAATTTGCCTGAAAATTTGAATCTTAGGACAACGGACAGTAAAGTAAATTCAAATGTGCAGAGGGGAGGTATCGATTCCTTGGATGTAATTATCAACGATAGTCTGCAAAGCCAGGACAGCTTCGGAAAATGGATAAACCTCATGATTTCTGATTCACCAAGTTCTATAAATGACTCAGGTCTAGAATCCTCGGTTTCATCTGTTCATGATTCATATTCTCCGGCGATGGATCATCATCAACCTTCTCTGCCCGAACAAATCCTGGTCACTGGATTATTTAATGACAAATATCTGCACCTTGCAAAGTCCAATCTATTTTGTATCTGTGGGGATGTAAGTGTTCCCATGGAAATTATTCAAGCTGGTGTCTACCGATGCTGGATACCACCTCATTCCCCTGGTTTAGTGGACCTCTATATGAGCTTTGGCAGCCACAAGCCCATTAGCCAAGTAGTTAATTTTGAGTATCGCCAGGAGCCTGCTGCAGCTTCTATAGAAGAGAGGTACAGCTGGGATGAATTTCAACTTCAGATGAGGCTTTCGTTTTTGCTCTTTGCTACAAAAAAGAGCTTTGCACTTACCTCTAGCAAATTATCGCCGGATGCATTGAAGGAGGCTAAGAAATTTGTCTCCAATACCACGTATATTTCTAAAAGTTGGCAATACTTGCTTGAATCAACTAAAGACCGTAAAATTCCATTTCCACAGGCAAAAGATGCCTTGTATGAAATTGCATTAAAAAATAGCCTAAAGGAATGGCTGTTGGAAAGAATTATCTTAGGTTGTCAGACTACTGAACATGATGTCCAAGGTCAAGGTGTAATCCATTTGTGCTCAATCTTGGGATATACATGGGCTGTTTCCTTATTTTCATGGTCAGGTTTTTCATTAAATTTCCGTGATAAGTTCGGATGGACAGCTCTGCATTGGGCAGCTTATTGTGGAAGGGAGAAGATGGTTGCAGCTCTATTATCTGCAGGGGCAAGGCCAAATTTGGTCACAGATCCTACTCCTGAATATCCTGGTGGATGTACTGCTGCTGATCTTGCTAGTATGAAGGGTTTTGATGGATTAGCAGCTTATCTTTCAGAAAAGTCACTGGTTGGGCAGTTCAATGATATGAGTATAGCTGGAAATATCAGTGGCACCCTCAAACCCATCACAAGTGATTCAGGCAATTCTGAGAACCTCAATGAGGATCAGCTGTATATTAAGGATACACTAGCAGCTTACCAAACAGCTGCTGAAGCAGCAGCACGCATACAAGCTGCATTTAGGGAGCACTCATTCAAATTACGAACTAAGGCGGTTGAACTTTCTAGTCCAGAGGCTGAAGTACGCCAAATAGTTGCAGCAATGAAGATTCAACATGCCTTTCGGGACTTTGGGTCAAGGAAGTTACTGGCAGCTGCTGCTCGCATACAGTATACCTACCGTACATGGAAGATGCGTCAACAATTTCTCCACATGCGACGCCAGGCAATCAAAATTCAGGCTGCTTACCGGGCATTCCACGAGCGGAAGTACTATCGTAGAATTCTTTGGTCTGTTGGAGTGGTTGAGAAAGCAATTCTGCGTTGGCGTTTAAAGAGGAGAGGCCTCCGTGGGCTCCAAGTCAATCCTGTCCAAGAAATGGTAGATCAGAGGGAGGAAACAGAGAATGATACAATGGAGGACTTTTACCGGACTAGCAGGAGACAAGCTGAAGAACGTATTGAGAGATCTGTAGTACGAGTTCAAGCCATGTTCCGCTCTAGGAAAGCTCAAGAAGAATATAGGAGGATGAAGCTGACCCAAAATCAAGCAAAGGATTGCCTTGTGCAGATGGAACAAGAACGTGAAGAGCTCCTCAATTCTGAGATTGATATGGGAAGACTGCATCAGCTGAACCATAATCAACCAGGAAGCAAGAGCATCACTTATACATCTATTCAATTCACTTCCCTATTTGATGTACTGAGAGAGCCACCTGAAACCTTCACCATATCCCATCTTGCGGACAATACTGCACATGAACACCTCCAAAGGACGGACATTGGAGTCAGCCAGATTGACCTTGCCCTTGCCTGTGGTGAAGTTTGTGAGGCCCATGTGATAACGAAGCTCATCCTCTGA 3126 0.4139 LHKKTKKDQNRVSRIVDSAYDRLDSLFRFYFFQFPIRLNPSLSLIEVESDSALRLEEVFAVSWRFLDGEQLSGAALGLRDSWIPYIARKMLRNFRKDGHNWRKKKDGKTVNEAHEHLKVGNEERIHVYYAHGQENPSFVRRCYWLLDKSQENIVLVHYRETQELQGSPVTPVYSNSSSASESTTPWILSEELDSRINKAYTGELNDNSTVRSHELRLHELNTLEWDELVVANDLKTSTTSTPAGGKIPYFHQEKQIGTLSRDVYVFFLRGALADISADEWRYLLLDSYVANVACSTIDVMKCCQQINMTNVANNSAAGIHSFDNLGNPVDGSNSAPYNLPENLNLRTTDSKVNSNVQRGGIDSLDVIINDSLQSQDSFGKWINLMISDSPSSINDSGLESSVSSVHDSYSPAMDHHQPSLPEQILVTGLFNDKYLHLAKSNLFCICGDVSVPMEIIQAGVYRCWIPPHSPGLVDLYMSFGSHKPISQVVNFEYRQEPAAASIEERYSWDEFQLQMRLSFLLFATKKSFALTSSKLSPDALKEAKKFVSNTTYISKSWQYLLESTKDRKIPFPQAKDALYEIALKNSLKEWLLERIILGCQTTEHDVQGQGVIHLCSILGYTWAVSLFSWSGFSLNFRDKFGWTALHWAAYCGREKMVAALLSAGARPNLVTDPTPEYPGGCTAADLASMKGFDGLAAYLSEKSLVGQFNDMSIAGNISGTLKPITSDSGNSENLNEDQLYIKDTLAAYQTAAEAAARIQAAFREHSFKLRTKAVELSSPEAEVRQIVAAMKIQHAFRDFGSRKLLAAAARIQYTYRTWKMRQQFLHMRRQAIKIQAAYRAFHERKYYRRILWSVGVVEKAILRWRLKRRGLRGLQVNPVQEMVDQREETENDTMEDFYRTSRRQAEERIERSVVRVQAMFRSRKAQEEYRRMKLTQNQAKDCLVQMEQEREELLNSEIDMGRLHQLNHNQPGSKSITYTSIQFTSLFDVLREPPETFTISHLADNTAHEHLQRTDIGVSQIDLALACGEVCEAHVITKLIL 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2851 1041 ProSiteProfiles CG-1 DNA-binding domain profile. 41 167 IPR005559 GO:0003677
Sto10g2851 1041 ProSiteProfiles IQ motif profile. 804 833 IPR000048 GO:0005515
Sto10g2851 1041 ProSiteProfiles IQ motif profile. 827 851 IPR000048 GO:0005515
Sto10g2851 1041 Gene3D Immunoglobulins 399 500 IPR013783 -
Sto10g2851 1041 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 308 960 - -
Sto10g2851 1041 SUPERFAMILY Ankyrin repeat 577 702 IPR036770 -
Sto10g2851 1041 SMART iq_5 803 825 IPR000048 GO:0005515
Sto10g2851 1041 SMART iq_5 826 848 IPR000048 GO:0005515
Sto10g2851 1041 SMART iq_5 908 930 IPR000048 GO:0005515
Sto10g2851 1041 Coils Coil 932 956 - -
Sto10g2851 1041 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 85 262 - -
Sto10g2851 1041 ProSiteProfiles IQ motif profile. 909 938 IPR000048 GO:0005515
Sto10g2851 1041 Gene3D - 803 851 - -
Sto10g2851 1041 Gene3D - 554 703 IPR036770 -
Sto10g2851 1041 SUPERFAMILY E set domains 423 494 IPR014756 -
Sto10g2851 1041 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 308 960 - -
Sto10g2851 1041 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 85 262 - -
Sto10g2851 1041 Pfam Ankyrin repeats (3 copies) 589 669 IPR002110 GO:0005515
Sto10g2851 1041 Pfam CG-1 domain 86 160 IPR005559 GO:0003677
Sto10g2851 1041 ProSiteProfiles Ankyrin repeat region circular profile. 640 668 - -
Sto10g2851 1041 SMART ANK_2a 640 669 IPR002110 GO:0005515
Sto10g2851 1041 SMART ANK_2a 679 710 IPR002110 GO:0005515
Sto10g2851 1041 SMART CG_1_2 44 162 IPR005559 GO:0003677
Sto10g2851 1041 ProSiteProfiles Ankyrin repeat profile. 640 672 IPR002110 GO:0005515
Sto10g2851 1041 Pfam IQ calmodulin-binding motif 829 848 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2851 Sto-Chr10 38511445 38523124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2851 285 940 CAMTA Transcription Factor Family AT3G16940 49.927 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Sto10g2851 Ank_2 2.2e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2851 K21596 - gmx:100793970 1078.54